7tj8

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(New page: '''Unreleased structure''' The entry 7tj8 is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures)
Current revision (08:57, 4 June 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 7tj8 is ON HOLD until Paper Publication
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==Cryo-EM structure of the human Nax channel in complex with beta3 solved in nanodiscs==
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<StructureSection load='7tj8' size='340' side='right'caption='[[7tj8]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7tj8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7TJ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7TJ8 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CLR:CHOLESTEROL'>CLR</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PEV:(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL+STEARATE'>PEV</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=POV:(2S)-3-(HEXADECANOYLOXY)-2-[(9Z)-OCTADEC-9-ENOYLOXY]PROPYL+2-(TRIMETHYLAMMONIO)ETHYL+PHOSPHATE'>POV</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7tj8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7tj8 OCA], [https://pdbe.org/7tj8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7tj8 RCSB], [https://www.ebi.ac.uk/pdbsum/7tj8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7tj8 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SCN7A_HUMAN SCN7A_HUMAN] Sodium leak channel functioning as an osmosensor regulating sodium ion levels in various tissues and organs. While most sodium channels are voltage-gated, SCN7A is not and lets sodium flow through membrane along its concentration gradient (PubMed:26537257, PubMed:35301303). In glial cells of the central nervous system, senses body-fluid sodium levels and controls salt intake behavior as well as voluntary water intake through activation of nearby neurons to maintain appropriate sodium levels in the body (By similarity). By mediating sodium influx into keratinocytes, also plays a role in skin barrier homeostasis (PubMed:26537257).[UniProtKB:B1AYL1]<ref>PMID:26537257</ref> <ref>PMID:35301303</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Unlike classical voltage-gated sodium (Na(V)) channels, Na(X) has been characterized as a voltage-insensitive, tetrodotoxin-resistant, sodium (Na(+))-activated channel involved in regulating Na(+) homeostasis. However, Na(X) remains refractory to functional characterization in traditional heterologous systems. Here, to gain insight into its atypical physiology, we determine structures of the human Na(X) channel in complex with the auxiliary beta3-subunit. Na(X) reveals structural alterations within the selectivity filter, voltage sensor-like domains, and pore module. We do not identify an extracellular Na(+)-sensor or any evidence for a Na(+)-based activation mechanism in Na(X). Instead, the S6-gate remains closed, membrane lipids fill the central cavity, and the domain III-IV linker restricts S6-dilation. We use protein engineering to identify three pore-wetting mutations targeting the hydrophobic S6-gate that unlock a robust voltage-insensitive leak conductance. This constitutively active Na(X)-QTT channel construct is non-selective among monovalent cations, inhibited by extracellular calcium, and sensitive to classical Na(V) channel blockers, including tetrodotoxin. Our findings highlight a functional diversity across the Na(V) channel scaffold, reshape our understanding of Na(X) physiology, and provide a template to demystify recalcitrant ion channels.
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Authors:
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, PMID:35301303<ref>PMID:35301303</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 7tj8" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Ion channels 3D structures|Ion channels 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Ciferri C]]
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[[Category: Kschonsak M]]
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[[Category: Noland CL]]
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[[Category: Payandeh J]]

Current revision

Cryo-EM structure of the human Nax channel in complex with beta3 solved in nanodiscs

PDB ID 7tj8

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