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2lbu

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Current revision (12:15, 15 November 2023) (edit) (undo)
 
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==HADDOCK calculated model of Congo red bound to the HET-s amyloid==
==HADDOCK calculated model of Congo red bound to the HET-s amyloid==
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<StructureSection load='2lbu' size='340' side='right'caption='[[2lbu]], [[NMR_Ensembles_of_Models | 4 NMR models]]' scene=''>
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<StructureSection load='2lbu' size='340' side='right'caption='[[2lbu]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2lbu]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Podas Podas]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LBU FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2lbu]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Podospora_anserina Podospora anserina]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LBU FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CGO:SODIUM+3,3-(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solid-state NMR</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2rnm|2rnm]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CGO:SODIUM+3,3-(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [https://pdbe.org/2lbu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [https://www.ebi.ac.uk/pdbsum/2lbu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lbu ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [https://pdbe.org/2lbu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [https://www.ebi.ac.uk/pdbsum/2lbu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lbu ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/HETS_PODAS HETS_PODAS]] Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>
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[https://www.uniprot.org/uniprot/HETS_PODAS HETS_PODAS] Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Podas]]
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[[Category: Podospora anserina]]
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[[Category: Aguzzi, A]]
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[[Category: Aguzzi A]]
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[[Category: Bockmann, A]]
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[[Category: Bockmann A]]
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[[Category: Ernst, M]]
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[[Category: Ernst M]]
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[[Category: Hornemann, S]]
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[[Category: Hornemann S]]
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[[Category: Meier, B H]]
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[[Category: Meier BH]]
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[[Category: Schutz, A K]]
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[[Category: Schutz AK]]
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[[Category: Soragni, A]]
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[[Category: Soragni A]]
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[[Category: Amyloid]]
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[[Category: Amyloid dye]]
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[[Category: Congo red]]
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[[Category: Ligand]]
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[[Category: Prion protein]]
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[[Category: Protein fibril]]
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Current revision

HADDOCK calculated model of Congo red bound to the HET-s amyloid

PDB ID 2lbu

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