This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7dbj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:30, 29 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7dbj' size='340' side='right'caption='[[7dbj]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
<StructureSection load='7dbj' size='340' side='right'caption='[[7dbj]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7dbj]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DBJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DBJ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7dbj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DBJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DBJ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=H1U:N-[[3-[2-[(phenylmethyl)amino]ethyl]-1H-indol-2-yl]methyl]cycloheptanamine'>H1U</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene>, <scene name='pdbligand=OXM:OXAMIC+ACID'>OXM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.551&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/L-lactate_dehydrogenase L-lactate dehydrogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.27 1.1.1.27] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=H1U:N-[[3-[2-[(phenylmethyl)amino]ethyl]-1H-indol-2-yl]methyl]cycloheptanamine'>H1U</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene>, <scene name='pdbligand=OXM:OXAMIC+ACID'>OXM</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dbj OCA], [https://pdbe.org/7dbj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dbj RCSB], [https://www.ebi.ac.uk/pdbsum/7dbj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dbj ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dbj OCA], [https://pdbe.org/7dbj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dbj RCSB], [https://www.ebi.ac.uk/pdbsum/7dbj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dbj ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LDHB_HUMAN LDHB_HUMAN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 19:
</div>
</div>
<div class="pdbe-citations 7dbj" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 7dbj" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Lactate dehydrogenase 3D structures|Lactate dehydrogenase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: L-lactate dehydrogenase]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Miwa, M]]
+
[[Category: Miwa M]]
-
[[Category: Sogabe, S]]
+
[[Category: Sogabe S]]
-
[[Category: Complex]]
+
-
[[Category: Inhibitor]]
+
-
[[Category: Lactate dehydrogenase]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Crystal structure of human LDHB in complex with NADH, oxamate, and AXKO-0046

PDB ID 7dbj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools