This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
7dc9
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='7dc9' size='340' side='right'caption='[[7dc9]], [[Resolution|resolution]] 1.70Å' scene=''> | <StructureSection load='7dc9' size='340' side='right'caption='[[7dc9]], [[Resolution|resolution]] 1.70Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[7dc9]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DC9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DC9 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7dc9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DC9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DC9 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GMP:GUANOSINE'>GMP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dc9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dc9 OCA], [https://pdbe.org/7dc9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dc9 RCSB], [https://www.ebi.ac.uk/pdbsum/7dc9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dc9 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dc9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dc9 OCA], [https://pdbe.org/7dc9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dc9 RCSB], [https://www.ebi.ac.uk/pdbsum/7dc9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dc9 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/GSDA_ARATH GSDA_ARATH] Catalyzes the hydrolytic deamination of guanosine, producing xanthosine and ammonia. Deaminates exclusively guanosine and 2'-deoxyguanosine but no other aminated purines, pyrimidines, or pterines. Deamination of guanosine by GSDA is the only source of xanthosine production in Arabidopsis.<ref>PMID:24130159</ref> | |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 19: | Line 19: | ||
</div> | </div> | ||
<div class="pdbe-citations 7dc9" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 7dc9" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Deaminase 3D structures|Deaminase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Arabidopsis thaliana]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Jia | + | [[Category: Jia Q]] |
| - | [[Category: Xie | + | [[Category: Xie W]] |
| - | [[Category: Zeng | + | [[Category: Zeng H]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
The structure of the Arabidopsis thaliana guanosine deaminase mutant E82Q complex with guanosine
| |||||||||||
