This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
7o8t
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='7o8t' size='340' side='right'caption='[[7o8t]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='7o8t' size='340' side='right'caption='[[7o8t]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[7o8t]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7O8T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7O8T FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7o8t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nonlabens_marinus_S1-08 Nonlabens marinus S1-08]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7O8T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7O8T FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=OLA:OLEIC+ACID'>OLA</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=OLA:OLEIC+ACID'>OLA</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7o8t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7o8t OCA], [https://pdbe.org/7o8t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7o8t RCSB], [https://www.ebi.ac.uk/pdbsum/7o8t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7o8t ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7o8t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7o8t OCA], [https://pdbe.org/7o8t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7o8t RCSB], [https://www.ebi.ac.uk/pdbsum/7o8t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7o8t ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/W8VZW3_9FLAO W8VZW3_9FLAO] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 16: | Line 19: | ||
</div> | </div> | ||
<div class="pdbe-citations 7o8t" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 7o8t" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Rhodopsin 3D structures|Rhodopsin 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
| Line 21: | Line 27: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Bruenle | + | [[Category: Nonlabens marinus S1-08]] |
| - | [[Category: Casadei | + | [[Category: Bruenle S]] |
| - | [[Category: Cirelli | + | [[Category: Casadei C]] |
| - | [[Category: Dworkowski | + | [[Category: Cirelli C]] |
| - | [[Category: Ehrenberg | + | [[Category: Dworkowski F]] |
| - | [[Category: Furrer | + | [[Category: Ehrenberg D]] |
| - | [[Category: Gashi | + | [[Category: Furrer A]] |
| - | [[Category: Gotthard | + | [[Category: Gashi D]] |
| - | [[Category: Heberle | + | [[Category: Gotthard G]] |
| - | [[Category: James | + | [[Category: Heberle J]] |
| - | [[Category: Johnson | + | [[Category: James D]] |
| - | [[Category: Kekilli | + | [[Category: Johnson P]] |
| - | [[Category: Knopp | + | [[Category: Kekilli D]] |
| - | [[Category: Ma | + | [[Category: Knopp G]] |
| - | [[Category: Martiel | + | [[Category: Ma P]] |
| - | [[Category: Milne | + | [[Category: Martiel I]] |
| - | [[Category: Mous | + | [[Category: Milne C]] |
| - | [[Category: Nass | + | [[Category: Mous S]] |
| - | [[Category: Nogly | + | [[Category: Nass K]] |
| - | [[Category: Ozerov | + | [[Category: Nogly P]] |
| - | [[Category: Panepucci | + | [[Category: Ozerov D]] |
| - | [[Category: Panneels | + | [[Category: Panepucci E]] |
| - | [[Category: Schapiro | + | [[Category: Panneels V]] |
| - | [[Category: Schertler | + | [[Category: Schapiro I]] |
| - | [[Category: Sen | + | [[Category: Schertler G]] |
| - | [[Category: Skopintsev | + | [[Category: Sen S]] |
| - | [[Category: Standfuss | + | [[Category: Skopintsev P]] |
| - | [[Category: Wang | + | [[Category: Standfuss J]] |
| - | [[Category: Weinert | + | [[Category: Wang M]] |
| - | [[Category: Wranik | + | [[Category: Weinert T]] |
| - | + | [[Category: Wranik M]] | |
| - | + | ||
| - | + | ||
Current revision
NmHR light state structure at 37.5 ms (35 - 40 ms) after photoexcitation determined by serial millisecond crystallography
| |||||||||||
Categories: Large Structures | Nonlabens marinus S1-08 | Bruenle S | Casadei C | Cirelli C | Dworkowski F | Ehrenberg D | Furrer A | Gashi D | Gotthard G | Heberle J | James D | Johnson P | Kekilli D | Knopp G | Ma P | Martiel I | Milne C | Mous S | Nass K | Nogly P | Ozerov D | Panepucci E | Panneels V | Schapiro I | Schertler G | Sen S | Skopintsev P | Standfuss J | Wang M | Weinert T | Wranik M
