7vgo
From Proteopedia
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==Hen egg lysozyme== | ==Hen egg lysozyme== | ||
| - | <StructureSection load='7vgo' size='340' side='right'caption='[[7vgo]]' scene=''> | + | <StructureSection load='7vgo' size='340' side='right'caption='[[7vgo]], [[Resolution|resolution]] 1.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7VGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7VGO FirstGlance]. <br> | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7VGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7VGO FirstGlance]. <br> | ||
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vgo OCA], [https://pdbe.org/7vgo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vgo RCSB], [https://www.ebi.ac.uk/pdbsum/7vgo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vgo ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vgo OCA], [https://pdbe.org/7vgo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vgo RCSB], [https://www.ebi.ac.uk/pdbsum/7vgo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vgo ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Protein structures fluctuate in solution; therefore, proteins have multiple stable structures that are slightly different from each other. In this study, we determined the crystal structure of hen egg lysozyme refolded after denaturation at acidic pH (rHEL) and found a structure different from native HEL (nHEL). The different local conformations of the peptide bond between Asp101 and Gly102 found in the crystal structure was supported by the NMR results for nHEL and rHEL. The NMR experiments also showed shifts in the heteronuclear single quantum coherence signals derived from Thr43 and Asp52. The chemical shift change of Asp52 could be explained by the crystal structure of rHEL, showing the conformational change of Tyr53, whose phenol ring directly lies on the main chain of Asp52. The catalytic activity of rHEL was similar to that of nHEL, indicating that the conformational change had little effect on activity. In contrast, conformational changes could be detected by the binding of monoclonal antibodies against HEL. Using multiple methods, we successfully detected the unusual structure of HEL, which might be another stable structure of HEL in solution. | ||
| + | |||
| + | Structural Analysis of Hen Egg Lysozyme Refolded after Denaturation at Acidic pH.,Oda M, Sano T, Kamatari YO, Abe Y, Ikura T, Ito N Protein J. 2022 Feb;41(1):71-78. doi: 10.1007/s10930-021-10036-3. Epub 2022 Jan, 30. PMID:35094218<ref>PMID:35094218</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7vgo" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Lysozyme 3D structures|Lysozyme 3D structures]] | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
Current revision
Hen egg lysozyme
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Categories: Large Structures | Ikura T | Ito N | Oda M
