This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1nhn
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==THE STRUCTURE OF THE HMG BOX AND ITS INTERACTION WITH DNA== | ==THE STRUCTURE OF THE HMG BOX AND ITS INTERACTION WITH DNA== | ||
| - | <StructureSection load='1nhn' size='340' side='right'caption='[[1nhn | + | <StructureSection load='1nhn' size='340' side='right'caption='[[1nhn]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1nhn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1nhn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cricetulus_griseus Cricetulus griseus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NHN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NHN FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nhn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nhn OCA], [https://pdbe.org/1nhn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nhn RCSB], [https://www.ebi.ac.uk/pdbsum/1nhn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nhn ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nhn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nhn OCA], [https://pdbe.org/1nhn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nhn RCSB], [https://www.ebi.ac.uk/pdbsum/1nhn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nhn ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/HMGB1_CRIGR HMGB1_CRIGR] DNA binding proteins that associates with chromatin and has the ability to bend DNA. Binds preferentially single-stranded DNA. Involved in V(D)J recombination by acting as a cofactor of the RAG complex. Acts by stimulating cleavage and RAG protein binding at the 23 bp spacer of conserved recombination signal sequences (RSS). Heparin-binding protein that has a role in the extension of neurite-type cytoplasmic processes in developing cells (By similarity). | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 25: | Line 24: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Cricetulus griseus]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Carillo | + | [[Category: Carillo MOM]] |
| - | [[Category: Cary | + | [[Category: Cary PD]] |
| - | [[Category: Crane-Robinson | + | [[Category: Crane-Robinson C]] |
| - | [[Category: Driscoll | + | [[Category: Driscoll PC]] |
| - | [[Category: Norman | + | [[Category: Norman DG]] |
| - | [[Category: Read | + | [[Category: Read CM]] |
| - | + | ||
Current revision
THE STRUCTURE OF THE HMG BOX AND ITS INTERACTION WITH DNA
| |||||||||||

