2mva
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
==Solution structure of the toxin, RhTx== | ==Solution structure of the toxin, RhTx== | ||
| - | <StructureSection load='2mva' size='340' side='right'caption='[[2mva | + | <StructureSection load='2mva' size='340' side='right'caption='[[2mva]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2mva]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Scolopendra_subspinipes Scolopendra subspinipes]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MVA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2MVA FirstGlance]. <br> | <table><tr><td colspan='2'>[[2mva]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Scolopendra_subspinipes Scolopendra subspinipes]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MVA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2MVA FirstGlance]. <br> | ||
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mva OCA], [https://pdbe.org/2mva PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mva RCSB], [https://www.ebi.ac.uk/pdbsum/2mva PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mva ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 10 models</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mva OCA], [https://pdbe.org/2mva PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mva RCSB], [https://www.ebi.ac.uk/pdbsum/2mva PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mva ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/TX41A_SCOMU TX41A_SCOMU] Extremely potent agonist and potentiator of TRPV1 (EC(50)=470-521.5 nM (mouse)) (PubMed:26420335, PubMed:32097697). It strongly promotes the heat activation process by downshifting the activation threshold temperature (PubMed:26420335). It preferably binds to the activated channel and promotes its opening (PubMed:26420335). Holding the channel closed by cooling prevents binding of this toxin, leaving it ineffective (PubMed:26420335). The toxin binds to the charge-rich outer pore region of the channel where it directly interacts with the pore helix and turret, two adjacent structural elements known to be critical for activation gating of TRPV1 (PubMed:26420335). In comparison with Sm1b, induces a TRPV1 desensitization with slower kinetics (20 seconds) (PubMed:32097697). In vivo, induces pain in mice after intraplantar injection (PubMed:26420335).<ref>PMID:26420335</ref> <ref>PMID:32097697</ref> Potent agonist and probable potentiator of TRPV1 (EC(50)=38.35 uM (mouse)) (PubMed:32097697). Also binds to the outer pore region of TRPV1 (PubMed:32097697). In comparison with Sm1a, induces a TRPV1 desensitization with faster kinetics (2 seconds) and leads to a more complete TRPV1 desensitization (PubMed:32097697). Desensitization is achieved by reducing both the open probability and the single-channel conductance upon prolonged exposure (PubMed:32097697).<ref>PMID:32097697</ref> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Scolopendra subspinipes]] | [[Category: Scolopendra subspinipes]] | ||
| - | [[Category: Hong | + | [[Category: Hong J]] |
| - | [[Category: Yang | + | [[Category: Yang S]] |
| - | + | ||
Current revision
Solution structure of the toxin, RhTx
| |||||||||||
