3f2z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:48, 17 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='3f2z' size='340' side='right'caption='[[3f2z]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
<StructureSection load='3f2z' size='340' side='right'caption='[[3f2z]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3f2z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacfn Bacfn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F2Z FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3f2z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_NCTC_9343 Bacteroides fragilis NCTC 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F2Z FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BF3579 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272559 BACFN])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f2z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2z OCA], [https://pdbe.org/3f2z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f2z RCSB], [https://www.ebi.ac.uk/pdbsum/3f2z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f2z ProSAT], [https://www.topsan.org/Proteins/NESGC/3f2z TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f2z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2z OCA], [https://pdbe.org/3f2z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f2z RCSB], [https://www.ebi.ac.uk/pdbsum/3f2z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f2z ProSAT], [https://www.topsan.org/Proteins/NESGC/3f2z TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5L9G5_BACFN Q5L9G5_BACFN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f2/3f2z_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f2/3f2z_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 20: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacfn]]
+
[[Category: Bacteroides fragilis NCTC 9343]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Acton, T B]]
+
[[Category: Acton TB]]
-
[[Category: Ciccosanti, C]]
+
[[Category: Ciccosanti C]]
-
[[Category: Everett, J K]]
+
[[Category: Everett JK]]
-
[[Category: Foote, E L]]
+
[[Category: Foote EL]]
-
[[Category: Forouhar, F]]
+
[[Category: Forouhar F]]
-
[[Category: Hunt, J F]]
+
[[Category: Hunt JF]]
-
[[Category: Janjua, H]]
+
[[Category: Janjua H]]
-
[[Category: Lee, D]]
+
[[Category: Lee D]]
-
[[Category: Lew, S]]
+
[[Category: Lew S]]
-
[[Category: Montelione, G T]]
+
[[Category: Montelione GT]]
-
[[Category: Structural genomic]]
+
[[Category: Nair R]]
-
[[Category: Nair, R]]
+
[[Category: Rost B]]
-
[[Category: Rost, B]]
+
[[Category: Seetharaman J]]
-
[[Category: Seetharaman, J]]
+
[[Category: Tong L]]
-
[[Category: Tong, L]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R]]
+
-
[[Category: Nesg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: The present c-terminal domain is predominantly composed of beta strands]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of the C-terminal domain of a chitobiase (BF3579) from Bacteroides fragilis, Northeast Structural Genomics Consortium Target BfR260B

PDB ID 3f2z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools