7z13

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(New page: '''Unreleased structure''' The entry 7z13 is ON HOLD Authors: Lewis, J.S., Sousa, J.S., Costa, A. Description: S. cerevisiae CMGE dimer nucleating origin DNA melting [[Category: Unrele...)
Current revision (12:40, 17 July 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 7z13 is ON HOLD
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==S. cerevisiae CMGE dimer nucleating origin DNA melting==
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<StructureSection load='7z13' size='340' side='right'caption='[[7z13]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7z13]] is a 18 chain structure with sequence from [https://en.wikipedia.org/wiki/DNA_molecule DNA molecule] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7Z13 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7Z13 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7z13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7z13 OCA], [https://pdbe.org/7z13 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7z13 RCSB], [https://www.ebi.ac.uk/pdbsum/7z13 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7z13 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A6A5Q1S9_YEASX A0A6A5Q1S9_YEASX]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The activation of eukaryotic origins of replication occurs in temporally separated steps to ensure that chromosomes are copied only once per cell cycle. First, the MCM helicase is loaded onto duplex DNA as an inactive double hexamer. Activation occurs after the recruitment of a set of firing factors that assemble two Cdc45-MCM-GINS (CMG) holo-helicases. CMG formation leads to the underwinding of DNA on the path to the establishment of the replication fork, but whether DNA becomes melted at this stage is unknown(1). Here we use cryo-electron microscopy to image ATP-dependent CMG assembly on a chromatinized origin, reconstituted in vitro with purified yeast proteins. We find that CMG formation disrupts the double hexamer interface and thereby exposes duplex DNA in between the two CMGs. The two helicases remain tethered, which gives rise to a splayed dimer, with implications for origin activation and replisome integrity. Inside each MCM ring, the double helix becomes untwisted and base pairing is broken. This comes as the result of ATP-triggered conformational changes in MCM that involve DNA stretching and protein-mediated stabilization of three orphan bases. Mcm2 pore-loop residues that engage DNA in our structure are dispensable for double hexamer loading and CMG formation, but are essential to untwist the DNA and promote replication. Our results explain how ATP binding nucleates origin DNA melting by the CMG and maintains replisome stability at initiation.
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Authors: Lewis, J.S., Sousa, J.S., Costa, A.
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Mechanism of replication origin melting nucleated by CMG helicase assembly.,Lewis JS, Gross MH, Sousa J, Henrikus SS, Greiwe JF, Nans A, Diffley JFX, Costa A Nature. 2022 Jun;606(7916):1007-1014. doi: 10.1038/s41586-022-04829-4. Epub 2022 , Jun 15. PMID:35705812<ref>PMID:35705812</ref>
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Description: S. cerevisiae CMGE dimer nucleating origin DNA melting
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Lewis, J.S]]
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<div class="pdbe-citations 7z13" style="background-color:#fffaf0;"></div>
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[[Category: Sousa, J.S]]
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== References ==
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[[Category: Costa, A]]
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<references/>
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__TOC__
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</StructureSection>
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[[Category: DNA molecule]]
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[[Category: Large Structures]]
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[[Category: Saccharomyces cerevisiae]]
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[[Category: Costa A]]
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[[Category: Lewis JS]]
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[[Category: Sousa JS]]

Current revision

S. cerevisiae CMGE dimer nucleating origin DNA melting

PDB ID 7z13

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