1z2k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:43, 30 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==NMR structure of the D1 domain of the Natural Killer Cell Receptor, 2B4==
==NMR structure of the D1 domain of the Natural Killer Cell Receptor, 2B4==
-
<StructureSection load='1z2k' size='340' side='right'caption='[[1z2k]], [[NMR_Ensembles_of_Models | 14 NMR models]]' scene=''>
+
<StructureSection load='1z2k' size='340' side='right'caption='[[1z2k]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1z2k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z2K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z2K FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1z2k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z2K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z2K FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Cd244, 2b4, Nmrk ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 14 models</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z2k OCA], [https://pdbe.org/1z2k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z2k RCSB], [https://www.ebi.ac.uk/pdbsum/1z2k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z2k ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z2k OCA], [https://pdbe.org/1z2k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z2k RCSB], [https://www.ebi.ac.uk/pdbsum/1z2k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z2k ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/CD244_MOUSE CD244_MOUSE]] Modulate other receptor-ligand interactions to enhance leukocyte activation (By similarity).
+
[https://www.uniprot.org/uniprot/CD244_MOUSE CD244_MOUSE] Modulate other receptor-ligand interactions to enhance leukocyte activation (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 14:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z2/1z2k_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z2/1z2k_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 36: Line 36:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lk3 transgenic mice]]
+
[[Category: Mus musculus]]
-
[[Category: Ames, J B]]
+
[[Category: Ames JB]]
-
[[Category: Lusin, J D]]
+
[[Category: Lusin JD]]
-
[[Category: Mariuzza, R]]
+
[[Category: Mariuzza R]]
-
[[Category: Vyas, V]]
+
[[Category: Vyas V]]
-
[[Category: Beta sandwich]]
+
-
[[Category: Immune system]]
+
-
[[Category: Immunoglobulin motif]]
+
-
[[Category: Natural killer cell receptor]]
+
-
[[Category: V-domain]]
+

Current revision

NMR structure of the D1 domain of the Natural Killer Cell Receptor, 2B4

PDB ID 1z2k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools