2pz0
From Proteopedia
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<StructureSection load='2pz0' size='340' side='right'caption='[[2pz0]], [[Resolution|resolution]] 1.91Å' scene=''> | <StructureSection load='2pz0' size='340' side='right'caption='[[2pz0]], [[Resolution|resolution]] 1.91Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2pz0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2pz0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis_MB4 Caldanaerobacter subterraneus subsp. tengcongensis MB4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PZ0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PZ0 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pz0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pz0 OCA], [https://pdbe.org/2pz0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pz0 RCSB], [https://www.ebi.ac.uk/pdbsum/2pz0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pz0 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pz0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pz0 OCA], [https://pdbe.org/2pz0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pz0 RCSB], [https://www.ebi.ac.uk/pdbsum/2pz0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pz0 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/GDPD_CALS4 GDPD_CALS4] Glycerophosphodiester phosphodiesterase hydrolyzes glycerophosphodiesters into glycerol-3-phosphate (G3P) and the corresponding alcohol (PubMed:18214974). Can use glycerophosphocholine (PubMed:18214974).<ref>PMID:18214974</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pz/2pz0_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pz/2pz0_consurf.spt"</scriptWhenChecked> | ||
| - | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Caldanaerobacter subterraneus subsp. tengcongensis MB4]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: An | + | [[Category: An XM]] |
| - | [[Category: Liang | + | [[Category: Liang DC]] |
| - | [[Category: Liu | + | [[Category: Liu JF]] |
| - | [[Category: Shi | + | [[Category: Shi L]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of Glycerophosphodiester Phosphodiesterase (GDPD) from T. tengcongensis
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