User:Anna Pressel/Sandbox1
From Proteopedia
< User:Anna Pressel(Difference between revisions)
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| - | + | <StructureSection load='6wv4' size='350' frame='true' side='right' caption='VKOR 6wv4' scene='<Vkor_with_cap_domain/1'>VKOR Cap Domain</scene>'> | |
| - | <StructureSection load='6wv4' size='350' frame='true' side='right' caption='VKOR 6wv4' scene=''> | + | |
This is a default text for your page '''Anna Pressel/Sandbox1'''. Click above on '''edit this page''' to modify. Be careful with the < and > signs. | This is a default text for your page '''Anna Pressel/Sandbox1'''. Click above on '''edit this page''' to modify. Be careful with the < and > signs. | ||
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue. | You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue. | ||
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[[Image:VKOR_Open_Conformation.png|400px|right|thumb|Figure 1]] | [[Image:VKOR_Open_Conformation.png|400px|right|thumb|Figure 1]] | ||
| - | + | <ref name="Liu">PMID:33154105</ref> | |
== Function == | == Function == | ||
| - | + | <ref name="Ransey">PMID:28504306</ref> | |
[https://proteopedia.org/wiki/index.php/6wvi VKOR Pufferfish Model] | [https://proteopedia.org/wiki/index.php/6wvi VKOR Pufferfish Model] | ||
== Disease == | == Disease == | ||
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== Structural highlights == | == Structural highlights == | ||
| - | + | <scene name='90/905590/Vkor_with_cap_domain/1'>VKOR Cap Domain</scene>=''Vitamin K Epoxide Reductase''= | |
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes. | This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes. | ||
Current revision
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
- ↑ Liu S, Li S, Shen G, Sukumar N, Krezel AM, Li W. Structural basis of antagonizing the vitamin K catalytic cycle for anticoagulation. Science. 2020 Nov 5. pii: science.abc5667. doi: 10.1126/science.abc5667. PMID:33154105 doi:http://dx.doi.org/10.1126/science.abc5667
- ↑ Ransey E, Paredes E, Dey SK, Das SR, Heroux A, Macbeth MR. Crystal structure of the Entamoeba histolytica RNA lariat debranching enzyme EhDbr1 reveals a catalytic Zn(2+) /Mn(2+) heterobinucleation. FEBS Lett. 2017 Jul;591(13):2003-2010. doi: 10.1002/1873-3468.12677. Epub 2017, Jun 14. PMID:28504306 doi:http://dx.doi.org/10.1002/1873-3468.12677
Student Contributors
- Anna Pressel
- George Pappadeas
