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3gyu
From Proteopedia
(Difference between revisions)
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<StructureSection load='3gyu' size='340' side='right'caption='[[3gyu]], [[Resolution|resolution]] 2.40Å' scene=''> | <StructureSection load='3gyu' size='340' side='right'caption='[[3gyu]], [[Resolution|resolution]] 2.40Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3gyu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3gyu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Strongyloides_stercoralis Strongyloides stercoralis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GYU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GYU FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DL7:(5BETA,14BETA,17ALPHA,25R)-3-OXOCHOLEST-7-EN-26-OIC+ACID'>DL7</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gyu OCA], [https://pdbe.org/3gyu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gyu RCSB], [https://www.ebi.ac.uk/pdbsum/3gyu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gyu ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gyu OCA], [https://pdbe.org/3gyu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gyu RCSB], [https://www.ebi.ac.uk/pdbsum/3gyu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gyu ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q9XZJ5_STRER Q9XZJ5_STRER] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gyu ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gyu ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | Nematode parasitism is a worldwide health problem resulting in malnutrition and morbidity in over 1 billion people. The molecular mechanisms governing infection are poorly understood. Here, we report that an evolutionarily conserved nuclear hormone receptor signaling pathway governs development of the stage 3 infective larvae (iL3) in several nematode parasites, including Strongyloides stercoralis, Ancylostoma spp., and Necator americanus. As in the free-living Caenorhabditis elegans, steroid hormone-like dafachronic acids induced recovery of the dauer-like iL3 in parasitic nematodes by activating orthologs of the nuclear receptor DAF-12. Moreover, administration of dafachronic acid markedly reduced the pathogenic iL3 population in S. stercoralis, indicating the potential use of DAF-12 ligands to treat disseminated strongyloidiasis. To understand the pharmacology of targeting DAF-12, we solved the 3-dimensional structure of the S. stercoralis DAF-12 ligand-binding domain cocrystallized with dafachronic acids. These results reveal the molecular basis for DAF-12 ligand binding and identify nuclear receptors as unique therapeutic targets in parasitic nematodes. | ||
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| - | Identification of the nuclear receptor DAF-12 as a therapeutic target in parasitic nematodes.,Wang Z, Zhou XE, Motola DL, Gao X, Suino-Powell K, Conneely A, Ogata C, Sharma KK, Auchus RJ, Lok JB, Hawdon JM, Kliewer SA, Xu HE, Mangelsdorf DJ Proc Natl Acad Sci U S A. 2009 Jun 9;106(23):9138-43. Epub 2009 Jun 2. PMID:19497877<ref>PMID:19497877</ref> | ||
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| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 3gyu" style="background-color:#fffaf0;"></div> | ||
| - | == References == | ||
| - | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Strongyloides stercoralis]] |
| - | [[Category: Auchus | + | [[Category: Auchus RJ]] |
| - | [[Category: Conneely | + | [[Category: Conneely A]] |
| - | [[Category: Kliewer | + | [[Category: Kliewer SA]] |
| - | [[Category: Mangelsdorf | + | [[Category: Mangelsdorf DJ]] |
| - | [[Category: Motola | + | [[Category: Motola DL]] |
| - | [[Category: Ogata | + | [[Category: Ogata C]] |
| - | [[Category: Sharma | + | [[Category: Sharma KK]] |
| - | [[Category: Suino-Powell | + | [[Category: Suino-Powell K]] |
| - | [[Category: Wang | + | [[Category: Wang Z]] |
| - | [[Category: Xu | + | [[Category: Xu HE]] |
| - | [[Category: Zhou | + | [[Category: Zhou XE]] |
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Current revision
Nuclear receptor DAF-12 from parasitic nematode Strongyloides stercoralis in complex with its physiological ligand dafachronic acid delta 7
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Categories: Homo sapiens | Large Structures | Strongyloides stercoralis | Auchus RJ | Conneely A | Kliewer SA | Mangelsdorf DJ | Motola DL | Ogata C | Sharma KK | Suino-Powell K | Wang Z | Xu HE | Zhou XE

