This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2v3g

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:04, 13 December 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2v3g' size='340' side='right'caption='[[2v3g]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
<StructureSection load='2v3g' size='340' side='right'caption='[[2v3g]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2v3g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"ruminiclostridium_thermocellum"_(viljoen_et_al._1926)_yutin_and_galperin_2013 "ruminiclostridium thermocellum" (viljoen et al. 1926) yutin and galperin 2013]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V3G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V3G FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2v3g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus Acetivibrio thermocellus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V3G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V3G FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=NOY:(2R,3S,4R,5R)-5-(HYDROXYMETHYL)PIPERIDINE-2,3,4-TRIOL'>NOY</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1v0a|1v0a]], [[2bv9|2bv9]], [[2bvd|2bvd]], [[2cip|2cip]], [[2cit|2cit]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=NOY:(2R,3S,4R,5R)-5-(HYDROXYMETHYL)PIPERIDINE-2,3,4-TRIOL'>NOY</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v3g OCA], [https://pdbe.org/2v3g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v3g RCSB], [https://www.ebi.ac.uk/pdbsum/2v3g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v3g ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v3g OCA], [https://pdbe.org/2v3g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v3g RCSB], [https://www.ebi.ac.uk/pdbsum/2v3g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v3g ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GUNH_ACET2 GUNH_ACET2] This enzyme catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 24: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cellulase]]
+
[[Category: Acetivibrio thermocellus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Davies, G J]]
+
[[Category: Davies GJ]]
-
[[Category: Gloster, T M]]
+
[[Category: Gloster TM]]
-
[[Category: Meloncelli, P J]]
+
[[Category: Meloncelli PJ]]
-
[[Category: Money, V A]]
+
[[Category: Money VA]]
-
[[Category: Stick, R V]]
+
[[Category: Stick RV]]
-
[[Category: Tarling, C A]]
+
[[Category: Tarling CA]]
-
[[Category: Withers, S G]]
+
[[Category: Withers SG]]
-
[[Category: Beta-1 4 beta-1 3 glucanase]]
+
-
[[Category: Carbohydrate metabolism]]
+
-
[[Category: Cellulose degradation]]
+
-
[[Category: Glycosidase]]
+
-
[[Category: Glycoside hydrolase family 26]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Lichenase]]
+
-
[[Category: Polysaccharide degradation]]
+

Current revision

Structure of a family 26 lichenase in complex with noeuromycin

PDB ID 2v3g

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools