2vbg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:13, 13 December 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2vbg' size='340' side='right'caption='[[2vbg]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='2vbg' size='340' side='right'caption='[[2vbg]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2vbg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacterium_lactis"_lister_1873 "bacterium lactis" lister 1873]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VBG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VBG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2vbg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VBG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VBG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=R1T:2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-[(1R)-1-HYDROXYETHYL]-3-METHYL-2-THIENYL}ETHYL+TRIHYDROGEN+DIPHOSPHATE'>R1T</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2vbf|2vbf]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=R1T:2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-[(1R)-1-HYDROXYETHYL]-3-METHYL-2-THIENYL}ETHYL+TRIHYDROGEN+DIPHOSPHATE'>R1T</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vbg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vbg OCA], [https://pdbe.org/2vbg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vbg RCSB], [https://www.ebi.ac.uk/pdbsum/2vbg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vbg ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vbg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vbg OCA], [https://pdbe.org/2vbg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vbg RCSB], [https://www.ebi.ac.uk/pdbsum/2vbg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vbg ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6QBS4_9LACT Q6QBS4_9LACT]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 31: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacterium lactis lister 1873]]
+
[[Category: Lactococcus lactis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Berthold, C L]]
+
[[Category: Berthold CL]]
-
[[Category: Gocke, D]]
+
[[Category: Gocke D]]
-
[[Category: Leeper, F]]
+
[[Category: Leeper F]]
-
[[Category: Pohl, M]]
+
[[Category: Pohl M]]
-
[[Category: Schneider, G]]
+
[[Category: Schneider G]]
-
[[Category: Wood, M D]]
+
[[Category: Wood MD]]
-
[[Category: Flavoprotein]]
+
-
[[Category: Kdca]]
+
-
[[Category: Lyase]]
+
-
[[Category: Thdp-dependent enzyme]]
+
-
[[Category: Thiamine pyrophosphate]]
+

Current revision

The complex structure of the branched-chain keto acid decarboxylase (KdcA) from Lactococcus lactis with 2R-1-hydroxyethyl-deazaThDP

PDB ID 2vbg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools