3icf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:16, 30 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='3icf' size='340' side='right'caption='[[3icf]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='3icf' size='340' side='right'caption='[[3icf]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3icf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ICF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ICF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3icf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ICF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ICF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">G6347, PPT1, YGR123C ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phosphoprotein_phosphatase Phosphoprotein phosphatase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.16 3.1.3.16] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3icf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3icf OCA], [https://pdbe.org/3icf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3icf RCSB], [https://www.ebi.ac.uk/pdbsum/3icf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3icf ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3icf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3icf OCA], [https://pdbe.org/3icf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3icf RCSB], [https://www.ebi.ac.uk/pdbsum/3icf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3icf ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PPT1_YEAST PPT1_YEAST]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 15: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ic/3icf_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ic/3icf_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 25: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 18824]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Phosphoprotein phosphatase]]
 
-
[[Category: Chang, C]]
 
-
[[Category: Cui, H]]
 
-
[[Category: Edwards, A M]]
 
-
[[Category: Joachimiak, A]]
 
-
[[Category: Kagan, O]]
 
-
[[Category: Structural genomic]]
 
-
[[Category: Savchenko, A]]
 
-
[[Category: Singer, A U]]
 
-
[[Category: Xu, X]]
 
-
[[Category: Yakunin, A F]]
 
-
[[Category: Hydrolase]]
 
-
[[Category: Iron]]
 
-
[[Category: Manganese]]
 
-
[[Category: Mcsg]]
 
-
[[Category: Metal-binding]]
 
-
[[Category: Metalloprotein]]
 
-
[[Category: Nucleus]]
 
-
[[Category: Phosphatase]]
 
-
[[Category: Protein phosphatase]]
 
-
[[Category: PSI, Protein structure initiative]]
 
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Serine/threonine]]
+
[[Category: Chang C]]
-
[[Category: Tpr repeat]]
+
[[Category: Cui H]]
 +
[[Category: Edwards AM]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Kagan O]]
 +
[[Category: Savchenko A]]
 +
[[Category: Singer AU]]
 +
[[Category: Xu X]]
 +
[[Category: Yakunin AF]]

Current revision

Structure of Protein serine/threonine phosphatase from Saccharomyces cerevisiae with similarity to human phosphatase PP5

PDB ID 3icf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools