7u6f

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'''Unreleased structure'''
 
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The entry 7u6f is ON HOLD until Mar 04 2024
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==Mouse retromer (VPS26/VPS35/VPS29) heterotrimers==
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<StructureSection load='7u6f' size='340' side='right'caption='[[7u6f]], [[Resolution|resolution]] 4.90&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7u6f]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7U6F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7U6F FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7u6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7u6f OCA], [https://pdbe.org/7u6f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7u6f RCSB], [https://www.ebi.ac.uk/pdbsum/7u6f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7u6f ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/VPS29_MOUSE VPS29_MOUSE] Essential component of the retromer complex, a complex required to retrieve lysosomal enzyme receptors (IGF2R and M6PR) from endosomes to the trans-Golgi network. Also required to regulate transcytosis of the polymeric immunoglobulin receptor (pIgR-pIgA). Has low protein phosphatase activity towards a serine-phosphorylated peptide derived from IGF2R (in vitro) (By similarity). Has no activity towards p-nitrophenylphosphate, p-nitrophenylphosphorylcholine or phosphatidylinositlphosphates (in vitro).
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Retromer (VPS26/VPS35/VPS29 subunits) assembles with multiple sorting nexin proteins on membranes to mediate endosomal recycling of transmembrane protein cargoes. Retromer has been implicated in other cellular processes, including mitochondrial homeostasis, nutrient sensing, autophagy, and fission events. Mechanisms for mammalian retromer assembly remain undefined, and retromer engages multiple sorting nexin proteins to sort cargoes to different destinations. Published structures demonstrate mammalian retromer forms oligomers in vitro, but several structures were poorly resolved. We report here improved retromer oligomer structures using single-particle cryo-EM by combining data collected from tilted specimens with multiple advancements in data processing, including using a 3D starting model for enhanced automated particle picking in RELION. We used a retromer mutant (3KE retromer) that breaks VPS35-mediated interfaces to determine a structure of a new assembly interface formed by the VPS26A and VPS35 N-termini. The interface reveals how an N-terminal VPS26A arrestin saddle can link retromer chains by engaging a neighboring VPS35 N- terminus, on the opposite side from the well-characterized C-VPS26/N-VPS35 interaction observed within heterotrimers. The new interaction interface exhibits substantial buried surface area ( approximately 7000 A(2)) and further suggests that metazoan retromer may serve as an adaptable scaffold.
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Authors: Kendall, A.K., Chandra, M., Jackson, L.P.
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Improved mammalian retromer cryo-EM structures reveal a new assembly interface.,Kendall AK, Chandra M, Xie B, Wan W, Jackson LP J Biol Chem. 2022 Nov;298(11):102523. doi: 10.1016/j.jbc.2022.102523. Epub 2022 , Sep 26. PMID:36174678<ref>PMID:36174678</ref>
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Description: Mouse retromer (VPS26/VPS35/VPS29) heterotrimers
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Chandra, M]]
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<div class="pdbe-citations 7u6f" style="background-color:#fffaf0;"></div>
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[[Category: Jackson, L.P]]
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[[Category: Kendall, A.K]]
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==See Also==
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*[[Vacuolar protein sorting-associated protein 3D structures|Vacuolar protein sorting-associated protein 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Mus musculus]]
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[[Category: Chandra M]]
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[[Category: Jackson LP]]
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[[Category: Kendall AK]]

Current revision

Mouse retromer (VPS26/VPS35/VPS29) heterotrimers

PDB ID 7u6f

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