7fb8

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Current revision (10:56, 15 November 2023) (edit) (undo)
 
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==De Novo-Designed and Disulfide-Bridged Peptide Heterodimer - hd1==
<StructureSection load='7fb8' size='340' side='right'caption='[[7fb8]]' scene=''>
<StructureSection load='7fb8' size='340' side='right'caption='[[7fb8]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7fb8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_M13 Escherichia virus M13]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7FB8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7FB8 FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7fb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7fb8 OCA], [https://pdbe.org/7fb8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7fb8 RCSB], [https://www.ebi.ac.uk/pdbsum/7fb8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7fb8 ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LE1:3-SULFANYL-L-VALINE'>LE1</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7fb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7fb8 OCA], [https://pdbe.org/7fb8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7fb8 RCSB], [https://www.ebi.ac.uk/pdbsum/7fb8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7fb8 ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Peptide heterodimers are prevalent in nature, which are not only functional macromolecules but molecular tools for chemical and synthetic biology. Computational methods have also been developed to design heterodimers of advanced functions. However, these peptide heterodimers are usually formed through noncovalent interactions, which are prone to dissociate and subject to concentration-dependent nonspecific aggregation. Heterodimers crosslinked with interchain disulfide bonds are more stable, but it represents a formidable challenge for both the computational design of heterodimers and the manipulation of disulfide pairing for heterodimer synthesis and applications. Here, we report the design, synthesis and application of interchain disulfide-bridged peptide heterodimers with mutual orthogonality by combining computational de novo designs with a directed disulfide pairing strategy. These heterodimers can be used as not only scaffolds for generating functional molecules but chemical tools or building blocks for protein labeling and construction of crosslinking hybrids. This study thus opens the door for using this unexplored dimeric structure space for many biological applications.
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De novo design and directed folding of disulfide-bridged peptide heterodimers.,Yao S, Moyer A, Zheng Y, Shen Y, Meng X, Yuan C, Zhao Y, Yao H, Baker D, Wu C Nat Commun. 2022 Mar 22;13(1):1539. doi: 10.1038/s41467-022-29210-x. PMID:35318337<ref>PMID:35318337</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7fb8" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Escherichia virus M13]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Z-disk]]
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[[Category: Baker D]]
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[[Category: Moyer A]]
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[[Category: Wu C]]
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[[Category: Yao H]]
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[[Category: Yao S]]
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[[Category: Zheng Y]]

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De Novo-Designed and Disulfide-Bridged Peptide Heterodimer - hd1

PDB ID 7fb8

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