7v9n
From Proteopedia
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<StructureSection load='7v9n' size='340' side='right'caption='[[7v9n]], [[Resolution|resolution]] 1.90Å' scene=''> | <StructureSection load='7v9n' size='340' side='right'caption='[[7v9n]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7V9N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7V9N FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7v9n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7v9n OCA], [https://pdbe.org/7v9n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7v9n RCSB], [https://www.ebi.ac.uk/pdbsum/7v9n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7v9n ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7v9n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7v9n OCA], [https://pdbe.org/7v9n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7v9n RCSB], [https://www.ebi.ac.uk/pdbsum/7v9n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7v9n ProSAT]</span></td></tr> | ||
</table> | </table> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | Lanthipeptides are an important group of natural products with diverse biological functions, and their biosynthesis requires the removal of N-terminal leader peptides (LPs) by designated proteases. LanPM1 enzymes, a subgroup of M1 zinc-metallopeptidases, have been recently identified as bifunctional proteases with both endo- and aminopeptidase activities to remove LPs of class III and class IV lanthipeptides. Herein, we report the biochemical and structural characterization of EryP as the LanPM1 enzyme from the biosynthesis of class III lanthipeptide erythreapeptin. We determined X-ray crystal structures of EryP in three conformational states, the open, intermediate and closed states, and identified a unique interdomain Ca(2+) binding site as a regulatory element that modulates its domain dynamics and proteolytic activity. Inspired by this regulatory Ca(2+) binding, we developed a strategy to engineer LanPM1 enzymes for enhanced catalytic activities by strengthening interdomain associations and driving the conformational equilibrium toward their closed forms. | ||
- | + | ==See Also== | |
- | + | *[[Aminopeptidase 3D structures|Aminopeptidase 3D structures]] | |
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | + | [[Category: Bao R]] | |
- | [[Category: Bao | + | [[Category: Zhao C]] |
- | [[Category: Zhao | + | [[Category: Zhao NL]] |
- | [[Category: Zhao | + | |
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Current revision
Crystal structure of the lanthipeptide zinc-metallopeptidase EryP from saccharopolyspora erythraea in closed state
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Categories: Large Structures | Bao R | Zhao C | Zhao NL