3pgy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:54, 6 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3pgy' size='340' side='right'caption='[[3pgy]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
<StructureSection load='3pgy' size='340' side='right'caption='[[3pgy]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3pgy]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Staac Staac]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PGY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PGY FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3pgy]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_COL Staphylococcus aureus subsp. aureus COL]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PGY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PGY FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLY:GLYCINE'>GLY</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.92&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">glyA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=93062 STAAC])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLY:GLYCINE'>GLY</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glycine_hydroxymethyltransferase Glycine hydroxymethyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.2.1 2.1.2.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pgy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pgy OCA], [https://pdbe.org/3pgy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pgy RCSB], [https://www.ebi.ac.uk/pdbsum/3pgy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pgy ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pgy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pgy OCA], [https://pdbe.org/3pgy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pgy RCSB], [https://www.ebi.ac.uk/pdbsum/3pgy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pgy ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/GLYA_STAAC GLYA_STAAC]] Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity).[HAMAP-Rule:MF_00051]
+
[https://www.uniprot.org/uniprot/GLYA_STAAC GLYA_STAAC] Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity).[HAMAP-Rule:MF_00051]
==See Also==
==See Also==
Line 16: Line 15:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Glycine hydroxymethyltransferase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Staac]]
+
[[Category: Staphylococcus aureus subsp. aureus COL]]
-
[[Category: Anderson, W F]]
+
[[Category: Anderson WF]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Joachimiak, A]]
+
[[Category: Kwon K]]
-
[[Category: Kwon, K]]
+
[[Category: Makowska-Grzyska M]]
-
[[Category: Makowska-Grzyska, M]]
+
[[Category: Osipiuk J]]
-
[[Category: Osipiuk, J]]
+
-
[[Category: Csgid]]
+
-
[[Category: Idp00749]]
+
-
[[Category: Serine hydroxymethyltransferase]]
+
-
[[Category: Transferase]]
+

Current revision

Serine hydroxymethyltransferase from Staphylococcus aureus, S95P mutant.

PDB ID 3pgy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools