7ywd

From Proteopedia

(Difference between revisions)

Current revision

Human GDAP1 core domain, trigonal crystal form

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/7ywd"

Categories: Homo sapiens | Large Structures | Kursula P | Raasakka A

@@ Line 3: / Line 3: @@
 <StructureSection load='7ywd' size='340' side='right'caption='[[7ywd]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[7ywd]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7YWD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7YWD FirstGlance]. <br>
+<table><tr><td colspan='2'>[[7ywd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7YWD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7YWD FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7q6k|7q6k]], [[7q6j|7q6j]]</div></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
 <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ywd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ywd OCA], [https://pdbe.org/7ywd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ywd RCSB], [https://www.ebi.ac.uk/pdbsum/7ywd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ywd ProSAT]</span></td></tr>
 </table>
 == Disease ==
-[[https://www.uniprot.org/uniprot/GDAP1_HUMAN GDAP1_HUMAN]] Charcot-Marie-Tooth disease type 2H;Autosomal recessive intermediate Charcot-Marie-Tooth disease type A;Autosomal dominant Charcot-Marie-Tooth disease type 2K;Autosomal recessive Charcot-Marie-Tooth disease with hoarseness;Charcot-Marie-Tooth disease type 4A. The disease is caused by variants affecting the gene represented in this entry.  The disease is caused by variants affecting the gene represented in this entry.  The disease is caused by variants affecting the gene represented in this entry.  The disease is caused by variants affecting the gene represented in this entry.
+[https://www.uniprot.org/uniprot/GDAP1_HUMAN GDAP1_HUMAN] Charcot-Marie-Tooth disease type 2H;Autosomal recessive intermediate Charcot-Marie-Tooth disease type A;Autosomal dominant Charcot-Marie-Tooth disease type 2K;Autosomal recessive Charcot-Marie-Tooth disease with hoarseness;Charcot-Marie-Tooth disease type 4A. The disease is caused by variants affecting the gene represented in this entry.  The disease is caused by variants affecting the gene represented in this entry.  The disease is caused by variants affecting the gene represented in this entry.  The disease is caused by variants affecting the gene represented in this entry.
 == Function ==
-[[https://www.uniprot.org/uniprot/GDAP1_HUMAN GDAP1_HUMAN]] Regulates the mitochondrial network by promoting mitochondrial fission.<ref>PMID:16172208</ref>
+[https://www.uniprot.org/uniprot/GDAP1_HUMAN GDAP1_HUMAN] Regulates the mitochondrial network by promoting mitochondrial fission.<ref>PMID:16172208</ref>
-<div style="background-color:#fffaf0;">
-== Publication Abstract from PubMed ==
-Charcot-Marie-Tooth disease (CMT) is the most common inherited peripheral polyneuropathy in humans, and its different subtypes are linked to mutations in dozens of different genes. Mutations in ganglioside-induced differentiation-associated protein 1 (GDAP1) cause two types of CMT, demyelinating CMT4A and axonal CMT2K. The GDAP1-linked CMT genotypes are mainly missense point mutations. Despite clinical profiling and in vivo studies on the mutations, the etiology of GDAP1-linked CMT is poorly understood. Here, we describe the biochemical and structural properties of the Finnish founding CMT2K mutation H123R and CMT2K-linked R120W, both of which are autosomal dominant mutations. The disease variant proteins retain close to normal structure and solution behavior, but both present a significant decrease in thermal stability. Using GDAP1 variant crystal structures, we identify a side-chain interaction network between helices 3, 6, and 7, which is affected by CMT mutations, as well as a hinge in the long helix 6, which is linked to structural flexibility. Structural analysis of GDAP1 indicates that CMT may arise from disruption of specific intra- and intermolecular interaction networks, leading to alterations in GDAP1 structure and stability, and, eventually, insufficient motor and sensory neuron function.
-Structural insights into Charcot-Marie-Tooth disease-linked mutations in human GDAP1.,Sutinen A, Nguyen GTT, Raasakka A, Muruganandam G, Loris R, Ylikallio E, Tyynismaa H, Bartesaghi L, Ruskamo S, Kursula P FEBS Open Bio. 2022 May 4. doi: 10.1002/2211-5463.13422. PMID:35509130<ref>PMID:35509130</ref>
-From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-</div>
-<div class="pdbe-citations 7ywd" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
 __TOC__
 </StructureSection>
+[[Category: Homo sapiens]]
 [[Category: Large Structures]]
-[[Category: Kursula, P]]
+[[Category: Kursula P]]
-[[Category: Raasakka, A]]
+[[Category: Raasakka A]]
-[[Category: Charcot-marie-tooth disease]]
-[[Category: Gst homology]]
-[[Category: Membrane protein]]
-[[Category: Mitochondrial outer membrane]]

7ywd

From Proteopedia

Current revision

Human GDAP1 core domain, trigonal crystal form

Structural highlights

Disease

Function

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

Personal tools

Navigation

Search

Toolbox