3r79

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:45, 26 March 2025) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3r79' size='340' side='right'caption='[[3r79]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='3r79' size='340' side='right'caption='[[3r79]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3r79]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R79 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R79 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3r79]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R79 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R79 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PR:PRASEODYMIUM+ION'>PR</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PR:PRASEODYMIUM+ION'>PR</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AGR_C_4983, Atu2747, PLPDE_III_YBL036c_like ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r79 OCA], [https://pdbe.org/3r79 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r79 RCSB], [https://www.ebi.ac.uk/pdbsum/3r79 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r79 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r79 OCA], [https://pdbe.org/3r79 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r79 RCSB], [https://www.ebi.ac.uk/pdbsum/3r79 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r79 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A9CHE9_AGRFC A9CHE9_AGRFC] Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.[HAMAP-Rule:MF_02087]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Agrfc]]
+
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Almo, S C]]
+
[[Category: Almo SC]]
-
[[Category: Eswaramoorthy, S]]
+
[[Category: Eswaramoorthy S]]
-
[[Category: Structural genomic]]
+
[[Category: Swaminathan S]]
-
[[Category: Swaminathan, S]]
+
-
[[Category: Alanine racemase]]
+
-
[[Category: Metal ion]]
+
-
[[Category: Nysgrc]]
+
-
[[Category: Psi-biology]]
+
-
[[Category: Pyridoxal 5' phosphate]]
+
-
[[Category: Tim barrel]]
+
-
[[Category: Unknown function]]
+
-
[[Category: Ybl036c-like protein]]
+

Current revision

Crystal structure of an uncharactertized protein from Agrobacterium tumefaciens

PDB ID 3r79

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools