8daj
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==Structure and Biochemistry of a Promiscuous Thermophilic Polyhydroxybutyrate Depolymerase from Lihuaxuella thermophilia== | |
+ | <StructureSection load='8daj' size='340' side='right'caption='[[8daj]], [[Resolution|resolution]] 1.20Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[8daj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lihuaxuella_thermophila Lihuaxuella thermophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8DAJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8DAJ FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8daj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8daj OCA], [https://pdbe.org/8daj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8daj RCSB], [https://www.ebi.ac.uk/pdbsum/8daj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8daj ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/A0A1H8IKU3_9BACL A0A1H8IKU3_9BACL] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | As the epidemic of single-use plastic worsens, it has become critical to identify fully renewable plastics such as those that can be degraded using enzymes. Here we describe the structure and biochemistry of an alkaline poly[(R)-3-hydroxybutyric acid] (PHB) depolymerase from the soil thermophile Lihuaxuella thermophila. Like other PHB depolymerases or PHBases, the Lihuaxuella enzyme is active against several different polyhydroxyalkanoates, including homo- and heteropolymers, but L. thermophila PHB depolymerase (LtPHBase) is unique in that it also hydrolyzes polylactic acid and polycaprolactone. LtPHBase exhibits optimal activity at 70 degrees C, and retains 88% of activity upon incubation at 65 degrees C for 3 days. The 1.2 A resolution crystal structure reveals an alpha/beta-hydrolase fold typical of PHBases, but with a shallow active site containing the catalytic Ser-His-Asp-triad that appears poised for broad substrate specificity. LtPHBase holds promise for the depolymerization of PHB and related bioplastics at high temperature, as would be required in bioindustrial operations like recycling or landfill management. | ||
- | + | Bioplastic degradation by a polyhydroxybutyrate depolymerase from a thermophilic soil bacterium.,Thomas GM, Quirk S, Huard DJE, Lieberman RL Protein Sci. 2022 Nov;31(11):e4470. doi: 10.1002/pro.4470. PMID:36222314<ref>PMID:36222314</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
+ | <div class="pdbe-citations 8daj" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Lihuaxuella thermophila]] | ||
+ | [[Category: Huard DJE]] | ||
+ | [[Category: Lieberman RL]] | ||
+ | [[Category: Quirk S]] | ||
+ | [[Category: Thomas GM]] |
Current revision
Structure and Biochemistry of a Promiscuous Thermophilic Polyhydroxybutyrate Depolymerase from Lihuaxuella thermophilia
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