3ryb

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Current revision (12:40, 14 March 2024) (edit) (undo)
 
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<StructureSection load='3ryb' size='340' side='right'caption='[[3ryb]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='3ryb' size='340' side='right'caption='[[3ryb]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3ryb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Laclm Laclm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RYB FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3ryb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._cremoris_MG1363 Lactococcus lactis subsp. cremoris MG1363]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RYB FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3rya|3rya]], [[3drf|3drf]], [[3drg|3drg]], [[3drh|3drh]], [[3dri|3dri]], [[3drj|3drj]], [[3drk|3drk]], [[3fto|3fto]]</div></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">llmg_0701, oppA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ryb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ryb OCA], [https://pdbe.org/3ryb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ryb RCSB], [https://www.ebi.ac.uk/pdbsum/3ryb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ryb ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ryb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ryb OCA], [https://pdbe.org/3ryb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ryb RCSB], [https://www.ebi.ac.uk/pdbsum/3ryb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ryb ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Function ==
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== Publication Abstract from PubMed ==
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[https://www.uniprot.org/uniprot/A2RJ53_LACLM A2RJ53_LACLM]
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Lactococcal oligopeptide-binding protein A (OppA) binds peptides with widely varying length and sequence. We previously hypothesized that a hydrophobic pocket in OppA preferentially binds a hydrophobic peptide side-chain and thus determines its binding register. Two crystal structures of OppA with different nonapeptides now indeed show binding in different registers.
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The importance of a hydrophobic pocket for peptide binding in lactococcal OppA.,Berntsson RP, Thunnissen AM, Poolman B, Slotboom DJ J Bacteriol. 2011 Jun 10. PMID:21665971<ref>PMID:21665971</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3ryb" style="background-color:#fffaf0;"></div>
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==See Also==
==See Also==
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Laclm]]
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[[Category: Lactococcus lactis subsp. cremoris MG1363]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Berntsson, R P.A]]
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[[Category: Berntsson RP-A]]
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[[Category: Poolman, B]]
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[[Category: Poolman B]]
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[[Category: Slotboom, D J]]
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[[Category: Slotboom D-J]]
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[[Category: Thunnissen, A M.W H]]
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[[Category: Thunnissen A-MWH]]
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[[Category: Membrane anchored]]
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[[Category: Peptide binding]]
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[[Category: Peptide binding protein]]
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[[Category: Substrate-binding protein]]
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Current revision

Lactococcal OppA complexed with SLSQSLSQS

PDB ID 3ryb

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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