This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


8dkm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "8dkm" [edit=sysop:move=sysop])
Current revision (07:48, 21 September 2022) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 8dkm is ON HOLD
+
==Cryo-EM structure of cystine-bound cystinosin in a lumen-open state==
-
 
+
<StructureSection load='8dkm' size='340' side='right'caption='[[8dkm]], [[Resolution|resolution]] 3.39&Aring;' scene=''>
-
Authors: Schmiege, P., Li, X.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[8dkm]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8DKM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8DKM FirstGlance]. <br>
-
Description: Cystinosin Cystine-bound Lumen-open
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IYY:L-cystine'>IYY</scene></td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8dkm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8dkm OCA], [https://pdbe.org/8dkm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8dkm RCSB], [https://www.ebi.ac.uk/pdbsum/8dkm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8dkm ProSAT]</span></td></tr>
-
[[Category: Schmiege, P]]
+
</table>
-
[[Category: Li, X]]
+
== Disease ==
 +
[[https://www.uniprot.org/uniprot/CTNS_HUMAN CTNS_HUMAN]] Juvenile nephropathic cystinosis;Ocular cystinosis;Infantile nephropathic cystinosis. The disease is caused by variants affecting the gene represented in this entry. The disease is caused by variants affecting the gene represented in this entry. The disease is caused by variants affecting the gene represented in this entry.
 +
== Function ==
 +
[[https://www.uniprot.org/uniprot/CTNS_HUMAN CTNS_HUMAN]] Cystine/H(+) symporter that mediates export of cystine, the oxidized dimer of cysteine, from lysosomes (PubMed:11689434, PubMed:18337546, PubMed:22232659, PubMed:29467429, PubMed:33208952, PubMed:15128704). Plays an important role in melanin synthesis by catalyzing cystine export from melanosomes, possibly by inhibiting pheomelanin synthesis (PubMed:22649030). In addition to cystine export, also acts as a positive regulator of mTORC1 signaling in kidney proximal tubular cells, via interactions with components of the v-ATPase and Ragulator complexes (By similarity). Also involved in small GTPase-regulated vesicle trafficking and lysosomal localization of LAMP2A, independently of cystine transporter activity (By similarity).[UniProtKB:P57757]<ref>PMID:11689434</ref> <ref>PMID:15128704</ref> <ref>PMID:18337546</ref> <ref>PMID:22232659</ref> <ref>PMID:22649030</ref> <ref>PMID:29467429</ref> <ref>PMID:33208952</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Mus musculus]]
 +
[[Category: Li X]]
 +
[[Category: Schmiege P]]

Current revision

Cryo-EM structure of cystine-bound cystinosin in a lumen-open state

PDB ID 8dkm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools