8a8f
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of Glc7 phosphatase in complex with the regulatory region of Ref2== | |
| + | <StructureSection load='8a8f' size='340' side='right'caption='[[8a8f]], [[Resolution|resolution]] 1.85Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[8a8f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8A8F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8A8F FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8a8f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8a8f OCA], [https://pdbe.org/8a8f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8a8f RCSB], [https://www.ebi.ac.uk/pdbsum/8a8f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8a8f ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Transcription termination by RNA polymerase II (RNA Pol II) is linked to RNA 3' end processing by the cleavage and polyadenylation factor (CPF or CPSF). CPF contains endonuclease, poly(A) polymerase, and protein phosphatase activities, which cleave and polyadenylate pre-mRNAs and dephosphorylate RNA Pol II to control transcription. Exactly how the RNA 3' end processing machinery is coupled to transcription remains unclear. Here, we combine in vitro reconstitution, structural studies, and genome-wide analyses to show that yeast CPF physically and functionally interacts with RNA Pol II. Surprisingly, CPF-mediated dephosphorylation promotes the formation of an RNA Pol II stalk-to-stalk homodimer in vitro. This dimer is compatible with transcription but not with the binding of transcription elongation factors. Disruption of the dimerization interface in cells causes transcription defects, including altered RNA Pol II abundance on protein-coding genes, tRNA genes, and intergenic regions. We hypothesize that RNA Pol II dimerization may provide a mechanistic basis for the allosteric model of transcription termination. | ||
| - | + | A direct interaction between CPF and RNA Pol II links RNA 3' end processing to transcription.,Carminati M, Rodriguez-Molina JB, Manav MC, Bellini D, Passmore LA Mol Cell. 2023 Dec 21;83(24):4461-4478.e13. doi: 10.1016/j.molcel.2023.11.004. , Epub 2023 Nov 28. PMID:38029752<ref>PMID:38029752</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| + | <div class="pdbe-citations 8a8f" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Saccharomyces cerevisiae]] | ||
| + | [[Category: Bellini D]] | ||
| + | [[Category: Carminati M]] | ||
| + | [[Category: Manav CM]] | ||
| + | [[Category: Passmore LA]] | ||
Current revision
Crystal structure of Glc7 phosphatase in complex with the regulatory region of Ref2
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