8dmf
From Proteopedia
(Difference between revisions)
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- | '''Unreleased structure''' | ||
- | + | ==Cryo-EM structure of the ribosome-bound Bacteroides thetaiotaomicron EF-G2== | |
+ | <StructureSection load='8dmf' size='340' side='right'caption='[[8dmf]], [[Resolution|resolution]] 4.00Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[8dmf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_VPI-5482 Bacteroides thetaiotaomicron VPI-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8DMF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8DMF FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8dmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8dmf OCA], [https://pdbe.org/8dmf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8dmf RCSB], [https://www.ebi.ac.uk/pdbsum/8dmf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8dmf ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q8A5S1_BACTN Q8A5S1_BACTN] Abolishes the inhibitory effect of tetracyclin on protein synthesis by a non-covalent modification of the ribosomes.[ARBA:ARBA00003987] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Protein synthesis is crucial for cell growth and survival yet one of the most energy-consuming cellular processes. How, then, do cells sustain protein synthesis under starvation conditions when energy is limited? To accelerate the translocation of mRNA-tRNAs through the ribosome, bacterial elongation factor G (EF-G) hydrolyzes energy-rich guanosine triphosphate (GTP) for every amino acid incorporated into a protein. Here, we identify an EF-G paralog-EF-G2-that supports translocation without hydrolyzing GTP in the gut commensal bacterium Bacteroides thetaiotaomicron. EF-G2's singular ability to sustain protein synthesis, albeit at slow rates, is crucial for bacterial gut colonization. EF-G2 is ~10-fold more abundant than canonical EF-G1 in bacteria harvested from murine ceca and, unlike EF-G1, specifically accumulates during carbon starvation. Moreover, we uncover a 26-residue region unique to EF-G2 that is essential for protein synthesis, EF-G2 dissociation from the ribosome, and responsible for the absence of GTPase activity. Our findings reveal how cells curb energy consumption while maintaining protein synthesis to advance fitness in nutrient-fluctuating environments. | ||
- | + | Gut colonization by Bacteroides requires translation by an EF-G paralog lacking GTPase activity.,Han W, Peng BZ, Wang C, Townsend GE 2nd, Barry NA, Peske F, Goodman AL, Liu J, Rodnina MV, Groisman EA EMBO J. 2023 Jan 16;42(2):e112372. doi: 10.15252/embj.2022112372. Epub 2022 Dec , 6. PMID:36472247<ref>PMID:36472247</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
+ | <div class="pdbe-citations 8dmf" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Bacteroides thetaiotaomicron VPI-5482]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Groisman EA]] | ||
+ | [[Category: Han W]] | ||
+ | [[Category: Liu J]] | ||
+ | [[Category: Wang C]] |
Current revision
Cryo-EM structure of the ribosome-bound Bacteroides thetaiotaomicron EF-G2
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