|
|
Line 3: |
Line 3: |
| <StructureSection load='3wtj' size='340' side='right'caption='[[3wtj]], [[Resolution|resolution]] 2.24Å' scene=''> | | <StructureSection load='3wtj' size='340' side='right'caption='[[3wtj]], [[Resolution|resolution]] 2.24Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[3wtj]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Great_pond_snail Great pond snail]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WTJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WTJ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[3wtj]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Lymnaea_stagnalis Lymnaea stagnalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WTJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WTJ FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TH4:{(2Z)-3-[(6-CHLOROPYRIDIN-3-YL)METHYL]-1,3-THIAZOLIDIN-2-YLIDENE}CYANAMIDE'>TH4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.24Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2zju|2zju]], [[2zjv|2zjv]], [[3wth|3wth]], [[3wti|3wti]], [[3wtk|3wtk]], [[3wtl|3wtl]], [[3wtm|3wtm]], [[3wtn|3wtn]], [[3wto|3wto]]</div></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TH4:{(2Z)-3-[(6-CHLOROPYRIDIN-3-YL)METHYL]-1,3-THIAZOLIDIN-2-YLIDENE}CYANAMIDE'>TH4</scene></td></tr> |
| <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wtj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wtj OCA], [https://pdbe.org/3wtj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wtj RCSB], [https://www.ebi.ac.uk/pdbsum/3wtj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wtj ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wtj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wtj OCA], [https://pdbe.org/3wtj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wtj RCSB], [https://www.ebi.ac.uk/pdbsum/3wtj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wtj ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[https://www.uniprot.org/uniprot/ACHP_LYMST ACHP_LYMST]] Binds to acetylcholine. Modulates neuronal synaptic transmission.
| + | [https://www.uniprot.org/uniprot/ACHP_LYMST ACHP_LYMST] Binds to acetylcholine. Modulates neuronal synaptic transmission. |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
Line 26: |
Line 26: |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Great pond snail]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Ihara, M]] | + | [[Category: Lymnaea stagnalis]] |
- | [[Category: Matsuda, K]] | + | [[Category: Ihara M]] |
- | [[Category: Oda, T]] | + | [[Category: Matsuda K]] |
- | [[Category: Okajima, T]] | + | [[Category: Oda T]] |
- | [[Category: Yamashita, A]] | + | [[Category: Okajima T]] |
- | [[Category: Acetylcholine binding]]
| + | [[Category: Yamashita A]] |
- | [[Category: Neonicotinoid]]
| + | |
- | [[Category: Nicotinic acetylcholine receptor]]
| + | |
- | [[Category: Signaling protein]]
| + | |
- | [[Category: Thiacloprid]]
| + | |
| Structural highlights
Function
ACHP_LYMST Binds to acetylcholine. Modulates neuronal synaptic transmission.
Publication Abstract from PubMed
Neonicotinoid insecticides target insect nicotinic acetylcholine receptors (nAChRs). Their widespread use and possible risks to pollinators make it extremely urgent to understand the mechanisms underlying their actions on insect nAChRs. We therefore elucidated X-ray crystal structures of the Lymnaea stagnalis acetylcholine binding protein (Ls-AChBP) and its Gln55Arg mutant, more closely resembling insect nAChRs, in complex with a nitromethylene imidacloprid analog (CH-IMI) and desnitro-imidacloprid metabolite (DN-IMI) as well as commercial neonicotinoids, imidacloprid, clothianidin, and thiacloprid. Unlike imidacloprid, clothianidin, and CH-IMI, thiacloprid did not stack with Tyr185 in the wild-type Ls-AChBP, but did in the Gln55Arg mutant, interacting electrostatically with Arg55. In contrast, DN-IMI lacking the NO2 group was directed away from Lys34 and Arg55 to form hydrogen bonds with Tyr89 in loop A and the main chain carbonyl of Trp143 in loop B. Unexpectedly, we found that several neonicotinoids interacted with Lys34 in loop G on the beta1 strand in the crystal structure of the Gln55Arg mutant. Basic residues introduced into the alpha7 nAChR at positions equivalent to AChBP Lys34 and Arg55 enhanced agonist actions of neonicotinoids, while reducing the actions of acetylcholine, (-)-nicotine, and DN-IMI. Thus, not only the basic residues in loop D, but also those in loop G determine the actions of neonicotinoids. These novel findings provide new insights into the modes of action of neonicotinoids and emerging derivatives.
Studies on an acetylcholine binding protein identify a basic residue in loop G on the beta1 strand as a new structural determinant of neonicotinoid actions.,Ihara M, Okajima T, Yamashita A, Oda T, Asano T, Matsui M, Sattelle DB, Matsuda K Mol Pharmacol. 2014 Dec;86(6):736-46. doi: 10.1124/mol.114.094698. Epub 2014 Sep , 29. PMID:25267717[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Ihara M, Okajima T, Yamashita A, Oda T, Asano T, Matsui M, Sattelle DB, Matsuda K. Studies on an acetylcholine binding protein identify a basic residue in loop G on the beta1 strand as a new structural determinant of neonicotinoid actions. Mol Pharmacol. 2014 Dec;86(6):736-46. doi: 10.1124/mol.114.094698. Epub 2014 Sep , 29. PMID:25267717 doi:http://dx.doi.org/10.1124/mol.114.094698
|