This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3zgp
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==NMR structure of the catalytic domain from E. faecium L,D- transpeptidase acylated by ertapenem== | ==NMR structure of the catalytic domain from E. faecium L,D- transpeptidase acylated by ertapenem== | ||
| - | <StructureSection load='3zgp' size='340' side='right'caption='[[3zgp | + | <StructureSection load='3zgp' size='340' side='right'caption='[[3zgp]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3zgp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3zgp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecium Enterococcus faecium]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZGP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZGP FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1RG:(4R,5S)-3-({(3S,5S)-5-[(3-CARBOXYPHENYL)CARBAMOYL]PYRROLIDIN-3-YL}SULFANYL)-5-[(1S,2R)-1-FORMYL-2-HYDROXYPROPYL]-4-METHYL-4,5-DIHYDRO-1H-PYRROLE-2-CARBOXYLIC+ACID'>1RG</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1RG:(4R,5S)-3-({(3S,5S)-5-[(3-CARBOXYPHENYL)CARBAMOYL]PYRROLIDIN-3-YL}SULFANYL)-5-[(1S,2R)-1-FORMYL-2-HYDROXYPROPYL]-4-METHYL-4,5-DIHYDRO-1H-PYRROLE-2-CARBOXYLIC+ACID'>1RG</scene></td></tr> | ||
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3zg4|3zg4]]</div></td></tr> | ||
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Peptidyltransferase Peptidyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.2.12 2.3.2.12] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zgp OCA], [https://pdbe.org/3zgp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zgp RCSB], [https://www.ebi.ac.uk/pdbsum/3zgp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zgp ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zgp OCA], [https://pdbe.org/3zgp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zgp RCSB], [https://www.ebi.ac.uk/pdbsum/3zgp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zgp ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q3Y185_ENTFD Q3Y185_ENTFD] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 22: | Line 22: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Enterococcus faecium]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | + | [[Category: Arthur M]] | |
| - | [[Category: Arthur | + | [[Category: Bougault C]] |
| - | [[Category: Bougault | + | [[Category: Dubee V]] |
| - | [[Category: Dubee | + | [[Category: Hugonnet JE]] |
| - | [[Category: Hugonnet | + | [[Category: Lecoq L]] |
| - | [[Category: Lecoq | + | [[Category: Simorre JP]] |
| - | [[Category: Simorre | + | [[Category: Triboulet S]] |
| - | [[Category: Triboulet | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
NMR structure of the catalytic domain from E. faecium L,D- transpeptidase acylated by ertapenem
| |||||||||||
