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| <StructureSection load='4a02' size='340' side='right'caption='[[4a02]], [[Resolution|resolution]] 0.95Å' scene=''> | | <StructureSection load='4a02' size='340' side='right'caption='[[4a02]], [[Resolution|resolution]] 0.95Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4a02]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"enterococcus_proteiformis"_thiercelin_and_jouhaud_1903 "enterococcus proteiformis" thiercelin and jouhaud 1903]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4A02 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4A02 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4a02]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4A02 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4A02 FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4a02 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4a02 OCA], [https://pdbe.org/4a02 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4a02 RCSB], [https://www.ebi.ac.uk/pdbsum/4a02 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4a02 ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.95Å</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4a02 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4a02 OCA], [https://pdbe.org/4a02 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4a02 RCSB], [https://www.ebi.ac.uk/pdbsum/4a02 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4a02 ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/LCHMO_ENTFA LCHMO_ENTFA] Involved in chitin degradation. Catalyzes the oxidative cleavage of glycosidic bonds in both alpha- and beta-chitin via a copper-dependent mechanism, leading to oxidized chitooligosaccharides with a dominance of even-numbered products. Acts synergistically with the chitinase EfChi18A, and combining the two enzymes leads to rapid and complete depolymerization of crystalline chitin, especially with beta-chitin as a substrate. Is likely involved in a chitin degradation pathway that allows E.faecalis V583 to grow on chitin as a carbon source.<ref>PMID:22210154</ref> |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Enterococcus proteiformis thiercelin and jouhaud 1903]] | + | [[Category: Enterococcus faecalis]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Bjoras, M]] | + | [[Category: Bjoras M]] |
- | [[Category: Bohle, L A]] | + | [[Category: Bohle LA]] |
- | [[Category: Dalhus, B]] | + | [[Category: Dalhus B]] |
- | [[Category: Eijsink, V G.H]] | + | [[Category: Eijsink VGH]] |
- | [[Category: Gaseidnes, S]] | + | [[Category: Gaseidnes S]] |
- | [[Category: Mathiesen, G]] | + | [[Category: Mathiesen G]] |
- | [[Category: Vaaje-Kolstad, G]] | + | [[Category: Vaaje-Kolstad G]] |
- | [[Category: Chitin binding protein]]
| + | |
- | [[Category: Chitin degradation]]
| + | |
- | [[Category: Chitin oxidation]]
| + | |
| Structural highlights
Function
LCHMO_ENTFA Involved in chitin degradation. Catalyzes the oxidative cleavage of glycosidic bonds in both alpha- and beta-chitin via a copper-dependent mechanism, leading to oxidized chitooligosaccharides with a dominance of even-numbered products. Acts synergistically with the chitinase EfChi18A, and combining the two enzymes leads to rapid and complete depolymerization of crystalline chitin, especially with beta-chitin as a substrate. Is likely involved in a chitin degradation pathway that allows E.faecalis V583 to grow on chitin as a carbon source.[1]
Publication Abstract from PubMed
Little information exists for the ability of enterococci to utilize chitin as a carbon source. We show that Enterococcus faecalis V583 can grow on chitin, and we describe two proteins, a family 18 chitinase (ef0361; EfChi18A) and a family 33 CBM (carbohydrate binding module) (ef0362; EfCBM33A) that catalyze chitin conversion in vitro. Various types of enzyme activity assays showed that EfChi18A has functional properties characteristic of an endochitinase. EfCBM33A belongs to a recently discovered family of enzymes that cleave glycosidic bonds via an oxidative mechanism and that act synergistically with classical hydrolytic enzymes (i.e., chitinases). The structure and function of this protein were probed in detail. An ultra-high-resolution crystal structure of EfCBM33A revealed details of a conserved binding surface that is optimized to interact with chitin and contains the catalytic center. Chromatography and mass spectrometry analyses of product formation showed that EfCBM33A cleaves chitin via the oxidative mechanism previously described for CBP21 from Serratia marcescens. Metal-depletion studies showed that EfCBM33A is a copper enzyme. In the presence of an external electron donor, EfCBM33A boosted the activity of EfChi18A, and combining the two enzymes led to rapid and complete conversion of beta-chitin to chitobiose. This study provides insight into the structure and function of the CBM33 family of enzymes, which, together with their fungal counterpart called GH61, currently receive considerable attention in the biomass processing field.
Characterization of the Chitinolytic Machinery of Enterococcus faecalis V583 and High-Resolution Structure of Its Oxidative CBM33 Enzyme.,Vaaje-Kolstad G, Bohle LA, Gaseidnes S, Dalhus B, Bjoras M, Mathiesen G, Eijsink VG J Mol Biol. 2011 Dec 22. PMID:22210154[2]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Vaaje-Kolstad G, Bohle LA, Gaseidnes S, Dalhus B, Bjoras M, Mathiesen G, Eijsink VG. Characterization of the Chitinolytic Machinery of Enterococcus faecalis V583 and High-Resolution Structure of Its Oxidative CBM33 Enzyme. J Mol Biol. 2011 Dec 22. PMID:22210154 doi:10.1016/j.jmb.2011.12.033
- ↑ Vaaje-Kolstad G, Bohle LA, Gaseidnes S, Dalhus B, Bjoras M, Mathiesen G, Eijsink VG. Characterization of the Chitinolytic Machinery of Enterococcus faecalis V583 and High-Resolution Structure of Its Oxidative CBM33 Enzyme. J Mol Biol. 2011 Dec 22. PMID:22210154 doi:10.1016/j.jmb.2011.12.033
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