3wg7
From Proteopedia
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<StructureSection load='3wg7' size='340' side='right'caption='[[3wg7]], [[Resolution|resolution]] 1.90Å' scene=''> | <StructureSection load='3wg7' size='340' side='right'caption='[[3wg7]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3wg7]] is a | + | <table><tr><td colspan='2'>[[3wg7]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WG7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WG7 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CDL:CARDIOLIPIN'>CDL</scene>, <scene name='pdbligand=CHD:CHOLIC+ACID'>CHD</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=CUA:DINUCLEAR+COPPER+ION'>CUA</scene>, <scene name='pdbligand=DMU:DECYL-BETA-D-MALTOPYRANOSIDE'>DMU</scene>, <scene name='pdbligand=HEA:HEME-A'>HEA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEK:(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL+(5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE'>PEK</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=PGV:(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL+(11E)-OCTADEC-11-ENOATE'>PGV</scene>, <scene name='pdbligand=PSC:(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM+4-OXIDE'>PSC</scene>, <scene name='pdbligand= | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CDL:CARDIOLIPIN'>CDL</scene>, <scene name='pdbligand=CHD:CHOLIC+ACID'>CHD</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=CUA:DINUCLEAR+COPPER+ION'>CUA</scene>, <scene name='pdbligand=DMU:DECYL-BETA-D-MALTOPYRANOSIDE'>DMU</scene>, <scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene>, <scene name='pdbligand=HEA:HEME-A'>HEA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEK:(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL+(5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE'>PEK</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=PGV:(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL+(11E)-OCTADEC-11-ENOATE'>PGV</scene>, <scene name='pdbligand=PSC:(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM+4-OXIDE'>PSC</scene>, <scene name='pdbligand=SAC:N-ACETYL-SERINE'>SAC</scene>, <scene name='pdbligand=TGL:TRISTEAROYLGLYCEROL'>TGL</scene>, <scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wg7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wg7 OCA], [https://pdbe.org/3wg7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wg7 RCSB], [https://www.ebi.ac.uk/pdbsum/3wg7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wg7 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wg7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wg7 OCA], [https://pdbe.org/3wg7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wg7 RCSB], [https://www.ebi.ac.uk/pdbsum/3wg7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wg7 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/COX1_BOVIN COX1_BOVIN] Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Bos taurus]] | [[Category: Bos taurus]] | ||
- | [[Category: Cytochrome-c oxidase]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Ago | + | [[Category: Ago H]] |
- | [[Category: Hatanaka | + | [[Category: Hatanaka M]] |
- | [[Category: Hikima | + | [[Category: Hikima T]] |
- | [[Category: Hirata | + | [[Category: Hirata K]] |
- | [[Category: Inubushi | + | [[Category: Inubushi Y]] |
- | [[Category: Ishikawa | + | [[Category: Ishikawa T]] |
- | [[Category: Kato | + | [[Category: Kato K]] |
- | [[Category: Kawahara | + | [[Category: Kawahara T]] |
- | [[Category: Murakami | + | [[Category: Murakami H]] |
- | [[Category: Muramoto | + | [[Category: Muramoto K]] |
- | [[Category: Ogura | + | [[Category: Ogura T]] |
- | [[Category: Shen | + | [[Category: Shen JR]] |
- | [[Category: Shinzawa-Itoh | + | [[Category: Shinzawa-Itoh K]] |
- | [[Category: Sugimoto | + | [[Category: Sugimoto H]] |
- | [[Category: Takemura | + | [[Category: Takemura S]] |
- | [[Category: Tono | + | [[Category: Tono K]] |
- | [[Category: Tsukihara | + | [[Category: Tsukihara T]] |
- | [[Category: Ueno | + | [[Category: Ueno G]] |
- | [[Category: Yabashi | + | [[Category: Yabashi M]] |
- | [[Category: Yamamoto | + | [[Category: Yamamoto M]] |
- | [[Category: Yamashita | + | [[Category: Yamashita E]] |
- | [[Category: Yano | + | [[Category: Yano N]] |
- | [[Category: Yoshikawa | + | [[Category: Yoshikawa S]] |
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Current revision
A 1.9 angstrom radiation damage free X-ray structure of large (420KDa) protein by femtosecond crystallography
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Categories: Bos taurus | Large Structures | Ago H | Hatanaka M | Hikima T | Hirata K | Inubushi Y | Ishikawa T | Kato K | Kawahara T | Murakami H | Muramoto K | Ogura T | Shen JR | Shinzawa-Itoh K | Sugimoto H | Takemura S | Tono K | Tsukihara T | Ueno G | Yabashi M | Yamamoto M | Yamashita E | Yano N | Yoshikawa S