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1gea

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(New page: 200px<br /> <applet load="1gea" size="450" color="white" frame="true" align="right" spinBox="true" caption="1gea" /> '''RECEPTOR-BOUND CONFORMATION OF PACAP21'''<b...)
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[[Image:1gea.gif|left|200px]]<br />
 
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<applet load="1gea" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1gea" />
 
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'''RECEPTOR-BOUND CONFORMATION OF PACAP21'''<br />
 
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==Overview==
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==RECEPTOR-BOUND CONFORMATION OF PACAP21==
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Many peptide hormones elicit a wide array of physiological effects by, binding to G-protein coupled receptors. We have determined the, conformation of pituitary adenylate cyclase activating polypeptide, PACAP(1--21)NH(2), bound to a PACAP-specific receptor by NMR spectroscopy., Residues 3--7 form a unique beta-coil structure that is preceded by an, N-terminal extended tail. This beta-coil creates a patch of hydrophobic, residues that is important for receptor binding. In contrast, the, C-terminal region (residues 8--21) forms an alpha-helix, similar to that, in the micelle-bound PACAP. Thus, the conformational difference between, PACAP in the receptor-bound and the micelle-bound states is limited to the, N-terminal seven residues. This observation is consistent with the, two-step ligand transportation model in which PACAP first binds to the, membrane nonspecifically and then diffuses two-dimensionally in search of, its receptor; a conformational change at the N-terminal region then allows, specific interactions between the ligand and the receptor.
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<StructureSection load='1gea' size='340' side='right'caption='[[1gea]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1gea]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GEA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GEA FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LYN:2,6-DIAMINO-HEXANOIC+ACID+AMIDE'>LYN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gea FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gea OCA], [https://pdbe.org/1gea PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gea RCSB], [https://www.ebi.ac.uk/pdbsum/1gea PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gea ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PACA_HUMAN PACA_HUMAN] Binding to its receptor activates G proteins and stimulates adenylate cyclase in pituitary cells.<ref>PMID:11175907</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Many peptide hormones elicit a wide array of physiological effects by binding to G-protein coupled receptors. We have determined the conformation of pituitary adenylate cyclase activating polypeptide, PACAP(1--21)NH(2), bound to a PACAP-specific receptor by NMR spectroscopy. Residues 3--7 form a unique beta-coil structure that is preceded by an N-terminal extended tail. This beta-coil creates a patch of hydrophobic residues that is important for receptor binding. In contrast, the C-terminal region (residues 8--21) forms an alpha-helix, similar to that in the micelle-bound PACAP. Thus, the conformational difference between PACAP in the receptor-bound and the micelle-bound states is limited to the N-terminal seven residues. This observation is consistent with the two-step ligand transportation model in which PACAP first binds to the membrane nonspecifically and then diffuses two-dimensionally in search of its receptor; a conformational change at the N-terminal region then allows specific interactions between the ligand and the receptor.
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==About this Structure==
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Conformation of a peptide ligand bound to its G-protein coupled receptor.,Inooka H, Ohtaki T, Kitahara O, Ikegami T, Endo S, Kitada C, Ogi K, Onda H, Fujino M, Shirakawa M Nat Struct Biol. 2001 Feb;8(2):161-5. PMID:11175907<ref>PMID:11175907</ref>
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1GEA is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1GEA OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Conformation of a peptide ligand bound to its G-protein coupled receptor., Inooka H, Ohtaki T, Kitahara O, Ikegami T, Endo S, Kitada C, Ogi K, Onda H, Fujino M, Shirakawa M, Nat Struct Biol. 2001 Feb;8(2):161-5. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=11175907 11175907]
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</div>
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[[Category: Single protein]]
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<div class="pdbe-citations 1gea" style="background-color:#fffaf0;"></div>
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[[Category: Endo, S.]]
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== References ==
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[[Category: Fujino, M.]]
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<references/>
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[[Category: Ikegami, T.]]
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__TOC__
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[[Category: Inooka, H.]]
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</StructureSection>
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[[Category: Kitada, C.]]
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[[Category: Homo sapiens]]
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[[Category: Kitahara, O.]]
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[[Category: Large Structures]]
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[[Category: Ogi, K.]]
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[[Category: Endo S]]
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[[Category: Ohtaki, T.]]
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[[Category: Fujino M]]
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[[Category: Onda, H.]]
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[[Category: Ikegami T]]
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[[Category: Shirakawa, M.]]
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[[Category: Inooka H]]
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[[Category: beta coil]]
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[[Category: Kitada C]]
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[[Category: consecutive beta turns]]
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[[Category: Kitahara O]]
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[[Category: helix]]
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[[Category: Ogi K]]
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[[Category: type-i beta turn]]
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[[Category: Ohtaki T]]
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[[Category: type-ii beta turn]]
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[[Category: Onda H]]
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[[Category: Shirakawa M]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 17:03:42 2007''
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RECEPTOR-BOUND CONFORMATION OF PACAP21

PDB ID 1gea

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