8b3m
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==Millisecond cryo-trapping by the spitrobot crystal plunger, CTXM-14 Avibactam complex, SSX, 1 sec== | |
| + | <StructureSection load='8b3m' size='340' side='right'caption='[[8b3m]], [[Resolution|resolution]] 1.97Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[8b3m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae Klebsiella pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8B3M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8B3M FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NXL:(2S,5R)-1-FORMYL-5-[(SULFOOXY)AMINO]PIPERIDINE-2-CARBOXAMIDE'>NXL</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8b3m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8b3m OCA], [https://pdbe.org/8b3m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8b3m RCSB], [https://www.ebi.ac.uk/pdbsum/8b3m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8b3m ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A0A0H3H219_KLEPH A0A0H3H219_KLEPH] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | We introduce the spitrobot, a protein crystal plunger, enabling reaction quenching via cryo-trapping with a time-resolution in the millisecond range. Protein crystals are mounted on canonical micromeshes on an electropneumatic piston, where the crystals are kept in a humidity and temperature-controlled environment, then reactions are initiated via the liquid application method (LAMA) and plunging into liquid nitrogen is initiated after an electronically set delay time to cryo-trap intermediate states. High-magnification images are automatically recorded before and after droplet deposition, prior to plunging. The SPINE-standard sample holder is directly plunged into a storage puck, enabling compatibility with high-throughput infrastructure. Here we demonstrate binding of glucose and 2,3-butanediol in microcrystals of xylose isomerase, and of avibactam and ampicillin in microcrystals of the extended spectrum beta-lactamase CTX-M-14. We also trap reaction intermediates and conformational changes in macroscopic crystals of tryptophan synthase to demonstrate that the spitrobot enables insight into catalytic events. | ||
| - | + | Millisecond cryo-trapping by the spitrobot crystal plunger simplifies time-resolved crystallography.,Mehrabi P, Sung S, von Stetten D, Prester A, Hatton CE, Kleine-Dopke S, Berkes A, Gore G, Leimkohl JP, Schikora H, Kollewe M, Rohde H, Wilmanns M, Tellkamp F, Schulz EC Nat Commun. 2023 Apr 25;14(1):2365. doi: 10.1038/s41467-023-37834-w. PMID:37185266<ref>PMID:37185266</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 8b3m" style="background-color:#fffaf0;"></div> |
| - | [[Category: | + | == References == |
| - | [[Category: | + | <references/> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: Kleine-Doepke | + | </StructureSection> |
| - | [[Category: | + | [[Category: Klebsiella pneumoniae]] |
| - | [[Category: Leimkohl | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Berkes A]] |
| - | [[Category: Prester | + | [[Category: Gore G]] |
| - | [[Category: | + | [[Category: Hatton CE]] |
| - | [[Category: | + | [[Category: Kleine-Doepke S]] |
| - | [[Category: | + | [[Category: Kollewe M]] |
| - | [[Category: | + | [[Category: Leimkohl JP]] |
| - | [[Category: | + | [[Category: Mehrabi P]] |
| - | [[Category: | + | [[Category: Prester A]] |
| + | [[Category: Rohde H]] | ||
| + | [[Category: Schikora H]] | ||
| + | [[Category: Schulz EC]] | ||
| + | [[Category: Sung S]] | ||
| + | [[Category: Tellkamp F]] | ||
| + | [[Category: Wilmanns M]] | ||
| + | [[Category: Von Stetten D]] | ||
Current revision
Millisecond cryo-trapping by the spitrobot crystal plunger, CTXM-14 Avibactam complex, SSX, 1 sec
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Categories: Klebsiella pneumoniae | Large Structures | Berkes A | Gore G | Hatton CE | Kleine-Doepke S | Kollewe M | Leimkohl JP | Mehrabi P | Prester A | Rohde H | Schikora H | Schulz EC | Sung S | Tellkamp F | Wilmanns M | Von Stetten D
