8bd5
From Proteopedia
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			 (New page: '''Unreleased structure'''  The entry 8bd5 is ON HOLD   Authors: Schmitz, M., Querques, I., Oberli, S., Chanez, C., Jinek, M.  Description: Cas12k-sgRNA-dsDNA-S15-TniQ-TnsC transposon recr...)  | 
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| - | '''Unreleased structure'''  | ||
| - | + | ==Cas12k-sgRNA-dsDNA-S15-TniQ-TnsC transposon recruitment complex==  | |
| + | <StructureSection load='8bd5' size='340' side='right'caption='[[8bd5]], [[Resolution|resolution]] 3.30Å' scene=''>  | ||
| + | == Structural highlights ==  | ||
| + | <table><tr><td colspan='2'>[[8bd5]] is a 13 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12], [https://en.wikipedia.org/wiki/Scytonema_hofmannii Scytonema hofmannii] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8BD5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8BD5 FirstGlance]. <br>  | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.3Å</td></tr>  | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>  | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8bd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8bd5 OCA], [https://pdbe.org/8bd5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8bd5 RCSB], [https://www.ebi.ac.uk/pdbsum/8bd5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8bd5 ProSAT]</span></td></tr>  | ||
| + | </table>  | ||
| + | == Function ==  | ||
| + | [https://www.uniprot.org/uniprot/A0A8X6EH11_9CYAN A0A8X6EH11_9CYAN]   | ||
| + | <div style="background-color:#fffaf0;">  | ||
| + | == Publication Abstract from PubMed ==  | ||
| + | CRISPR-Cas systems have been co-opted by Tn7-like transposable elements to direct RNA-guided transposition. Type V-K CRISPR-associated transposons rely on the concerted activities of the pseudonuclease Cas12k, the AAA+ ATPase TnsC, the Zn-finger protein TniQ, and the transposase TnsB. Here we present a cryo-electron microscopic structure of a target DNA-bound Cas12k-transposon recruitment complex comprised of RNA-guided Cas12k, TniQ, a polymeric TnsC filament and, unexpectedly, the ribosomal protein S15. Complex assembly, mediated by a network of interactions involving the guide RNA, TniQ, and S15, results in R-loop completion. TniQ contacts two TnsC protomers at the Cas12k-proximal filament end, likely nucleating its polymerization. Transposition activity assays corroborate our structural findings, implying that S15 is a bona fide component of the type V crRNA-guided transposon machinery. Altogether, our work uncovers key mechanistic aspects underpinning RNA-mediated assembly of CRISPR-associated transposons to guide their development as programmable tools for site-specific insertion of large DNA payloads.  | ||
| - | + | Structural basis for the assembly of the type V CRISPR-associated transposon complex.,Schmitz M, Querques I, Oberli S, Chanez C, Jinek M Cell. 2022 Dec 22;185(26):4999-5010.e17. doi: 10.1016/j.cell.2022.11.009. Epub , 2022 Nov 25. PMID:36435179<ref>PMID:36435179</ref>  | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>  | |
| - | [[Category:   | + | </div>  | 
| - | [[Category:   | + | <div class="pdbe-citations 8bd5" style="background-color:#fffaf0;"></div>  | 
| - | [[Category:   | + | == References ==  | 
| - | [[Category:   | + | <references/>  | 
| - | [[Category:   | + | __TOC__  | 
| - | [[Category:   | + | </StructureSection>  | 
| + | [[Category: Escherichia coli K-12]]  | ||
| + | [[Category: Large Structures]]  | ||
| + | [[Category: Scytonema hofmannii]]  | ||
| + | [[Category: Synthetic construct]]  | ||
| + | [[Category: Chanez C]]  | ||
| + | [[Category: Jinek M]]  | ||
| + | [[Category: Oberli S]]  | ||
| + | [[Category: Querques I]]  | ||
| + | [[Category: Schmitz M]]  | ||
Current revision
Cas12k-sgRNA-dsDNA-S15-TniQ-TnsC transposon recruitment complex
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