8bg9

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'''Unreleased structure'''
 
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The entry 8bg9 is ON HOLD
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==Murine amyloid-beta filaments with the Arctic mutation (E22G) from APP(NL-G-F) mouse brains | ABeta==
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<StructureSection load='8bg9' size='340' side='right'caption='[[8bg9]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8bg9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8BG9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8BG9 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8bg9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8bg9 OCA], [https://pdbe.org/8bg9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8bg9 RCSB], [https://www.ebi.ac.uk/pdbsum/8bg9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8bg9 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A4_MOUSE A4_MOUSE] Functions as a cell surface receptor and performs physiological functions on the surface of neurons relevant to neurite growth, neuronal adhesion and axonogenesis. Involved in cell mobility and transcription regulation through protein-protein interactions. Can promote transcription activation through binding to APBB1-KAT5 and inhibit Notch signaling through interaction with Numb. Couples to apoptosis-inducing pathways such as those mediated by G(O) and JIP. Inhibits G(o) alpha ATPase activity (By similarity). Acts as a kinesin I membrane receptor, mediating the axonal transport of beta-secretase and presenilin 1. May be involved in copper homeostasis/oxidative stress through copper ion reduction. Can regulate neurite outgrowth through binding to components of the extracellular matrix such as heparin and collagen I and IV (By similarity). The splice isoforms that contain the BPTI domain possess protease inhibitor activity. Induces a AGER-dependent pathway that involves activation of p38 MAPK, resulting in internalization of amyloid-beta peptide and leading to mitochondrial dysfunction in cultured cortical neurons (By similarity). Provides Cu(2+) ions for GPC1 which are required for release of nitric oxide (NO) and subsequent degradation of the heparan sulfate chains on GPC1.<ref>PMID:15677459</ref> Beta-amyloid peptides are lipophilic metal chelators with metal-reducing activity. Binds transient metals such as copper, zinc and iron. Rat and mouse beta-amyloid peptides bind only weakly transient metals and have little reducing activity due to substitutions of transient metal chelating residues. Beta-APP42 may activate mononuclear phagocytes in the brain and elicit inflammatory responses. Promotes both tau aggregation and TPK II-mediated phosphorylation. Also bind GPC1 in lipid rafts (By similarity).<ref>PMID:15677459</ref> The gamma-CTF peptides as well as the caspase-cleaved peptides, including C31, are potent enhancers of neuronal apoptosis.<ref>PMID:15677459</ref> N-APP binds TNFRSF21 triggering caspase activation and degeneration of both neuronal cell bodies (via caspase-3) and axons (via caspase-6) (By similarity).<ref>PMID:15677459</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The Arctic mutation, encoding E693G in the amyloid precursor protein (APP) gene [E22G in amyloid-beta (Abeta)], causes dominantly inherited Alzheimer's disease. Here, we report the high-resolution cryo-EM structures of Abeta filaments from the frontal cortex of a previously described case (AbetaPParc1) with the Arctic mutation. Most filaments consist of two pairs of non-identical protofilaments that comprise residues V12-V40 (human Arctic fold A) and E11-G37 (human Arctic fold B). They have a substructure (residues F20-G37) in common with the folds of type I and type II Abeta42. When compared to the structures of wild-type Abeta42 filaments, there are subtle conformational changes in the human Arctic folds, because of the lack of a side chain at G22, which may strengthen hydrogen bonding between mutant Abeta molecules and promote filament formation. A minority of Abeta42 filaments of type II was also present, as were tau paired helical filaments. In addition, we report the cryo-EM structures of Abeta filaments with the Arctic mutation from mouse knock-in line App(NL-G-F). Most filaments are made of two identical mutant protofilaments that extend from D1 to G37 (App(NL-G-F) murine Arctic fold). In a minority of filaments, two dimeric folds pack against each other in an anti-parallel fashion. The App(NL-G-F) murine Arctic fold differs from the human Arctic folds, but shares some substructure.
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Authors: Yang, Y., Zhang, W.J., Murzin, A.G., Schweighauser, M., Huang, M., Lovestam, S.K.A., Peak-Chew, S.Y., Macdonald, J., Lavenir, I., Ghetti, B., Graff, C., Kumar, A., Nordber, A., Goedert, M., Scheres, S.H.W.
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Cryo-EM structures of amyloid-beta filaments with the Arctic mutation (E22G) from human and mouse brains.,Yang Y, Zhang W, Murzin AG, Schweighauser M, Huang M, Lovestam S, Peak-Chew SY, Saito T, Saido TC, Macdonald J, Lavenir I, Ghetti B, Graff C, Kumar A, Nordberg A, Goedert M, Scheres SHW Acta Neuropathol. 2023 Mar;145(3):325-333. doi: 10.1007/s00401-022-02533-1. Epub , 2023 Jan 7. PMID:36611124<ref>PMID:36611124</ref>
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Description: Murine amyloid-beta filaments with the Arctic mutation (E22G) from APP(NL-G-F) mouse brains | ABeta
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Ghetti, B]]
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<div class="pdbe-citations 8bg9" style="background-color:#fffaf0;"></div>
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[[Category: Peak-Chew, S.Y]]
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== References ==
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[[Category: Lovestam, S.K.A]]
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<references/>
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[[Category: Huang, M]]
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__TOC__
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[[Category: Goedert, M]]
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</StructureSection>
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[[Category: Schweighauser, M]]
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[[Category: Large Structures]]
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[[Category: Lavenir, I]]
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[[Category: Mus musculus]]
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[[Category: Kumar, A]]
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[[Category: Ghetti B]]
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[[Category: Graff, C]]
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[[Category: Goedert M]]
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[[Category: Yang, Y]]
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[[Category: Graff C]]
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[[Category: Scheres, S.H.W]]
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[[Category: Huang M]]
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[[Category: Murzin, A.G]]
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[[Category: Kumar A]]
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[[Category: Zhang, W.J]]
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[[Category: Lavenir I]]
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[[Category: Macdonald, J]]
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[[Category: Lovestam SKA]]
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[[Category: Nordber, A]]
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[[Category: Macdonald J]]
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[[Category: Murzin AG]]
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[[Category: Nordber A]]
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[[Category: Peak-Chew SY]]
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[[Category: Scheres SHW]]
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[[Category: Schweighauser M]]
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[[Category: Yang Y]]
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[[Category: Zhang WJ]]

Current revision

Murine amyloid-beta filaments with the Arctic mutation (E22G) from APP(NL-G-F) mouse brains | ABeta

PDB ID 8bg9

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