7x7h
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of Fructose regulator/Histidine phosphocarrier protein complex from Vibrio cholerae== | |
| + | <StructureSection load='7x7h' size='340' side='right'caption='[[7x7h]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[7x7h]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7X7H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7X7H FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7x7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7x7h OCA], [https://pdbe.org/7x7h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7x7h RCSB], [https://www.ebi.ac.uk/pdbsum/7x7h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7x7h ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/FRUR_VIBCH FRUR_VIBCH] Regulates the expression of the fruBKA (fru) operon, which encodes proteins involved in the import and metabolism of fructose (PubMed:33476373, PubMed:33649152). In the absence of fructose 1-phosphate (F1P), binds to the promoter region of fruB, interferes with the binding of the RNA polymerase (RNAP) to the promoter and represses the expression of the operon (PubMed:33476373, PubMed:33649152). In the presence of F1P, activates the transcription of the fru operon by facilitating the binding of RNAP to the promoter (PubMed:33476373). Essential for the expression of the fru operon and thus for growth on fructose (PubMed:33476373).<ref>PMID:33476373</ref> <ref>PMID:33649152</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Phosphorylation state-dependent interactions of the phosphoenolpyruvate (PEP):carbohydrate phosphotransferase system (PTS) components with transcription factors play a key role in carbon catabolite repression (CCR) by glucose in bacteria. Glucose inhibits the PTS-dependent transport of fructose and is preferred over fructose in Vibrio cholerae, but the mechanism is unknown. We have recently shown that, contrary to Escherichia coli, the fructose-dependent transcriptional regulator FruR acts as an activator of the fru operon in V. cholerae and binding of the FruR-fructose 1-phosphate (F1P) complex to an operator facilitates RNA polymerase (RNAP) binding to the fru promoter. Here we show that, in the presence of glucose, dephosphorylated HPr, a general PTS component, binds to FruR. Whereas HPr does not affect DNA-binding affinity of FruR, regardless of the presence of F1P, it prevents the FruR-F1P complex from facilitating the binding of RNAP to the fru promoter. Structural and biochemical analyses of the FruR-HPr complex identify key residues responsible for the V. cholerae-specific FruR-HPr interaction not observed in E. coli. Finally, we reveal how the dephosphorylated HPr interacts with FruR in V. cholerae, whereas the phosphorylated HPr binds to CcpA, which is a global regulator of CCR in Bacillus subtilis and shows structural similarity to FruR. | ||
| - | + | HPr prevents FruR-mediated facilitation of RNA polymerase binding to the fru promoter in Vibrio cholerae.,Yoon CK, Lee SH, Zhang J, Lee HY, Kim MK, Seok YJ Nucleic Acids Res. 2023 Jun 23;51(11):5432-5448. doi: 10.1093/nar/gkad220. PMID:36987873<ref>PMID:36987873</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| + | <div class="pdbe-citations 7x7h" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Phosphocarrier protein HPr 3D structures|Phosphocarrier protein HPr 3D structures]] | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Vibrio cholerae]] | ||
| + | [[Category: Kim M-K]] | ||
| + | [[Category: Seok Y-J]] | ||
| + | [[Category: Yoon C-K]] | ||
| + | [[Category: Zhang J]] | ||
Current revision
Crystal structure of Fructose regulator/Histidine phosphocarrier protein complex from Vibrio cholerae
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