8fox
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 8fox is ON HOLD Authors: Ashaduzzaman, M., Bellizzi, J.J. Description: AbeH (Tryptophan-5-halogenase) Category: Unreleased Structures [[Categor...) |
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- | '''Unreleased structure''' | ||
- | + | ==AbeH (Tryptophan-5-halogenase)== | |
+ | <StructureSection load='8fox' size='340' side='right'caption='[[8fox]], [[Resolution|resolution]] 1.89Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[8fox]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Uncultured_bacterium Uncultured bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8FOX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8FOX FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8fox FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8fox OCA], [https://pdbe.org/8fox PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8fox RCSB], [https://www.ebi.ac.uk/pdbsum/8fox PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8fox ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/F6LWA5_9BACT F6LWA5_9BACT] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The flavin-dependent halogenase AbeH produces 5-chlorotryptophan in the biosynthetic pathway of the chlorinated bisindole alkaloid BE-54017. We report that in vitro, AbeH (assisted by the flavin reductase AbeF) can chlorinate and brominate tryptophan as well as other indole derivatives and substrates with phenyl and quinoline groups. We solved the X-ray crystal structures of AbeH alone and complexed with FAD, as well as crystal structures of the tryptophan-6-halogenase BorH alone, in complex with 6-chlorotryptophan, and in complex with FAD and tryptophan. Partitioning of FAD and tryptophan into different chains of BorH and failure to incorporate tryptophan into AbeH/FAD crystals suggested that flavin and tryptophan binding are negatively coupled in both proteins. ITC and fluorescence quenching experiments confirmed the ability of both AbeH and BorH to form binary complexes with FAD or tryptophan and the inability of tryptophan to bind to AbeH/FAD or BorH/FAD complexes. FAD could not bind to BorH/tryptophan complexes, but FAD appears to displace tryptophan from AbeH/tryptophan complexes in an endothermic entropically-driven process. | ||
- | + | Crystallographic and thermodynamic evidence of negative cooperativity of flavin and tryptophan binding in the flavin-dependent halogenases AbeH and BorH.,Ashaduzzaman M, Lingkon K, De Silva AJ, Bellizzi JJ 3rd bioRxiv [Preprint]. 2023 Aug 22:2023.08.22.554356. doi: , 10.1101/2023.08.22.554356. PMID:37662313<ref>PMID:37662313</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: Ashaduzzaman | + | <div class="pdbe-citations 8fox" style="background-color:#fffaf0;"></div> |
- | [[Category: Bellizzi | + | == References == |
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Uncultured bacterium]] | ||
+ | [[Category: Ashaduzzaman M]] | ||
+ | [[Category: Bellizzi JJ]] |
Current revision
AbeH (Tryptophan-5-halogenase)
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