8fq7

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(New page: '''Unreleased structure''' The entry 8fq7 is ON HOLD Authors: Abskharon, R., Sawaya, M.R., Cascio, D.C., Eisenberg, D.S. Description: Nanobody with WIW inserted in CDR3 loop to Inhibit...)
Current revision (11:57, 30 October 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8fq7 is ON HOLD
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==Nanobody with WIW inserted in CDR3 loop to Inhibit Growth of Alzheimer's Tau fibrils==
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<StructureSection load='8fq7' size='340' side='right'caption='[[8fq7]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8fq7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Camelus_dromedarius Camelus dromedarius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8FQ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8FQ7 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8fq7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8fq7 OCA], [https://pdbe.org/8fq7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8fq7 RCSB], [https://www.ebi.ac.uk/pdbsum/8fq7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8fq7 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Despite much effort, antibody therapies for Alzheimer's disease (AD) have shown limited efficacy. Challenges to the rational design of effective antibodies include the difficulty of achieving specific affinity to critical targets, poor expression, and antibody aggregation caused by buried charges and unstructured loops. To overcome these challenges, we grafted previously determined sequences of fibril-capping amyloid inhibitors onto a camel heavy chain antibody scaffold. These sequences were designed to cap fibrils of tau, known to form the neurofibrillary tangles of AD, thereby preventing fibril elongation. The nanobodies grafted with capping inhibitors blocked tau aggregation in biosensor cells seeded with postmortem brain extracts from AD and progressive supranuclear palsy (PSP) patients. The tau capping nanobody inhibitors also blocked seeding by recombinant tau oligomers. Another challenge to the design of effective antibodies is their poor blood-brain barrier (BBB) penetration. In this study, we also designed a bispecific nanobody composed of a nanobody that targets a receptor on the BBB and a tau capping nanobody inhibitor, conjoined by a flexible linker. We provide evidence that the bispecific nanobody improved BBB penetration over the tau capping inhibitor alone after intravenous administration in mice. Our results suggest that the design of synthetic antibodies that target sequences that drive protein aggregation may be a promising approach to inhibit the prion-like seeding of tau and other proteins involved in AD and related proteinopathies.
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Authors: Abskharon, R., Sawaya, M.R., Cascio, D.C., Eisenberg, D.S.
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Structure-based design of nanobodies that inhibit seeding of Alzheimer's patient-extracted tau fibrils.,Abskharon R, Pan H, Sawaya MR, Seidler PM, Olivares EJ, Chen Y, Murray KA, Zhang J, Lantz C, Bentzel M, Boyer DR, Cascio D, Nguyen BA, Hou K, Cheng X, Pardon E, Williams CK, Nana AL, Vinters HV, Spina S, Grinberg LT, Seeley WW, Steyaert J, Glabe CG, Ogorzalek Loo RR, Loo JA, Eisenberg DS Proc Natl Acad Sci U S A. 2023 Oct 10;120(41):e2300258120. doi: , 10.1073/pnas.2300258120. Epub 2023 Oct 6. PMID:37801475<ref>PMID:37801475</ref>
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Description: Nanobody with WIW inserted in CDR3 loop to Inhibit Growth of Alzheimer''s Tau fibrils.
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Sawaya, M.R]]
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<div class="pdbe-citations 8fq7" style="background-color:#fffaf0;"></div>
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[[Category: Cascio, D.C]]
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== References ==
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[[Category: Eisenberg, D.S]]
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<references/>
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[[Category: Abskharon, R]]
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__TOC__
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</StructureSection>
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[[Category: Camelus dromedarius]]
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[[Category: Large Structures]]
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[[Category: Abskharon R]]
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[[Category: Cascio DC]]
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[[Category: Eisenberg DS]]
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[[Category: Sawaya MR]]

Current revision

Nanobody with WIW inserted in CDR3 loop to Inhibit Growth of Alzheimer's Tau fibrils

PDB ID 8fq7

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