Template:STRUCTURE 1jk3
From Proteopedia
(Difference between revisions)
(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1jk3, resolution 1.09Å (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= <scene name='pdbligand=BAT...) |
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{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1jk3, resolution 1.09Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1jk3]], [[Resolution|resolution]] 1.09Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | + | ||
|LIGAND= <scene name='pdbligand=BAT:4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE'>BAT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | |LIGAND= <scene name='pdbligand=BAT:4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE'>BAT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Macrophage_elastase Macrophage elastase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.65 3.4.24.65] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Macrophage_elastase Macrophage elastase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.65 3.4.24.65] </span> | ||
| - | |GENE= | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04278 ZnMc_MMP]</span> | ||
| - | |RELATEDENTRY= | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jk3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jk3 OCA], [http://www.ebi.ac.uk/pdbsum/1jk3 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1jk3 RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jk3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jk3 OCA], [http://www.ebi.ac.uk/pdbsum/1jk3 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1jk3 RCSB]</span> | ||
| + | |FUNCTION={{GO|id=GO:0008233 | text = peptidase activity}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0003824 | text = catalytic activity}}{{GO|id=GO:0016787 | text = hydrolase activity}}{{GO|id=GO:0005509 | text = calcium ion binding}}{{GO|id=GO:0008237 | text = metallopeptidase activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0004234 | text = macrophage elastase activity}}{{GO|id=GO:0004222 | text = metalloendopeptidase activity}} | ||
| + | |PROCESS={{GO|id=GO:0008152 | text = metabolic process}}{{GO|id=GO:0006928 | text = cell motility}}{{GO|id=GO:0006508 | text = proteolysis}} | ||
| + | |COMPONENT={{GO|id=GO:0005578 | text = proteinaceous extracellular matrix}} | ||
| + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1jk3A00 1Jk3A00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006025 Ipr006025], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000585 Ipr000585], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001818 Ipr001818], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006026 Ipr006026], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002477 Ipr002477]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00413 PF00413]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66790 d1jk3a_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P39900 P39900]</span> | ||
| + | |uPDB=1JK3|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1jk3_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
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| 1jk3, resolution 1.09Å () | |||||||||
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| Ligands: | , , | ||||||||
| Activity: | Macrophage elastase, with EC number 3.4.24.65 | ||||||||
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| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
