8i11
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 8i11 is ON HOLD Authors: Gautam, A.K., Sharma, S., Gourinath, S., Kateriya, S. Description: Crystal structure of LOV1 domain of phototropin from Kl...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of LOV1 domain of phototropin from Klebsormidium nitens== | |
| + | <StructureSection load='8i11' size='340' side='right'caption='[[8i11]], [[Resolution|resolution]] 1.85Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[8i11]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsormidium_nitens Klebsormidium nitens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8I11 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8I11 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.855Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8i11 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8i11 OCA], [https://pdbe.org/8i11 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8i11 RCSB], [https://www.ebi.ac.uk/pdbsum/8i11 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8i11 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A0A1Y1HNG4_KLENI A0A1Y1HNG4_KLENI] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Phototropin (Phot), a blue light-sensing LOV domain protein, mediates blue light responses and is evolutionarily conserved across the green lineage. Klebsormidium nitens, a green terrestrial alga, presents a valuable opportunity to study adaptive responses from aquatic to land habitat transitions. We determined the crystal structure of Klebsormidium nitens Phot LOV1 domain (KnLOV1) in the dark and engineered different mutations (R60K, Q122N, and D33N) to modulate the lifetime of the photorecovery cycle. We observed unusual, slow recovery kinetics in the wild-type KnLOV1 domain (tau = 41 +/- 3 min) compared to different mutants (R60K: tau = 2.0 +/- 0.1 min, Q122N: tau = 1.7 +/- 0.1 min, D33N: tau = 9.6 +/- 0.1 min). Crystal structures of wild-type KnLOV1 and mutants revealed subtle but critical changes near the protein chromophore that is responsible for modulating protein dark recovery time. Our findings shed light on the unique structural and biochemical characteristics of the newly studied KnLOV1 and its evolutionary importance for phototropin-mediated physiology. | ||
| - | + | Unusual photodynamic characteristics of the light-oxygen-voltage domain of phototropin linked to terrestrial adaptation of Klebsormidium nitens.,Sharma S, Gautam AK, Singh R, Gourinath S, Kateriya S FEBS J. 2024 Sep 29. doi: 10.1111/febs.17284. PMID:39344087<ref>PMID:39344087</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 8i11" style="background-color:#fffaf0;"></div> |
| - | [[Category: | + | == References == |
| - | [[Category: | + | <references/> |
| - | [[Category: | + | __TOC__ |
| + | </StructureSection> | ||
| + | [[Category: Klebsormidium nitens]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Gautam AK]] | ||
| + | [[Category: Gourinath S]] | ||
| + | [[Category: Kateriya S]] | ||
| + | [[Category: Sharma S]] | ||
Current revision
Crystal structure of LOV1 domain of phototropin from Klebsormidium nitens
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