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1iam

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(New page: 200px<br /> <applet load="1iam" size="450" color="white" frame="true" align="right" spinBox="true" caption="1iam, resolution 2.10&Aring;" /> '''STRUCTURE OF THE TW...)
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[[Image:1iam.gif|left|200px]]<br />
 
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<applet load="1iam" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1iam, resolution 2.10&Aring;" />
 
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'''STRUCTURE OF THE TWO AMINO-TERMINAL DOMAINS OF HUMAN INTERCELLULAR ADHESION MOLECULE-1, ICAM-1'''<br />
 
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==Overview==
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==STRUCTURE OF THE TWO AMINO-TERMINAL DOMAINS OF HUMAN INTERCELLULAR ADHESION MOLECULE-1, ICAM-1==
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The normal function of human intercellular adhesion molecule-1 (ICAM-1) is, to provide adhesion between endothelial cells and leukocytes after injury, or stress. ICAM-1 binds to leukocyte function-associated antigen (LFA-1), or macrophage-1 antigen (Mac-1). However, ICAM-1 is also used as a, receptor by the major group of human rhinoviruses and is a catalyst for, the subsequent viral uncoating during cell entry. The three-dimensional, atomic structure of the two amino-terminal domains (D1 and D2) of ICAM-1, has been determined to 2.2-A resolution and fitted into a cryoelectron, microscopy reconstruction of a rhinovirus-ICAM-1 complex. Rhinovirus, attachment is confined to the BC, CD, DE, and FG loops of the, amino-terminal Ig-like domain (D1) at the end distal to the cellular, membrane. The loops are considerably different in structure to those of, human ICAM-2 or murine ICAM-1, which do not bind rhinoviruses. There are, extensive charge interactions between ICAM-1 and human rhinoviruses, which, are mostly conserved in both major and minor receptor groups of, rhinoviruses. The interaction of ICAMs with LFA-1 is known to be mediated, by a divalent cation bound to the insertion (I)-domain on the alpha chain, of LFA-1 and the carboxyl group of a conserved glutamic acid residue on, ICAMs. Domain D1 has been docked with the known structure of the I-domain., The resultant model is consistent with mutational data and provides a, structural framework for the adhesion between these molecules.
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<StructureSection load='1iam' size='340' side='right'caption='[[1iam]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1iam]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IAM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IAM FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1iam FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iam OCA], [https://pdbe.org/1iam PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1iam RCSB], [https://www.ebi.ac.uk/pdbsum/1iam PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iam ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ICAM1_HUMAN ICAM1_HUMAN] ICAM proteins are ligands for the leukocyte adhesion protein LFA-1 (integrin alpha-L/beta-2). During leukocyte trans-endothelial migration, ICAM1 engagement promotes the assembly of endothelial apical cups through ARHGEF26/SGEF and RHOG activation. In case of rhinovirus infection acts as a cellular receptor for the virus.<ref>PMID:2538243</ref> <ref>PMID:1968231</ref> <ref>PMID:11173916</ref> <ref>PMID:17875742</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ia/1iam_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1iam ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The normal function of human intercellular adhesion molecule-1 (ICAM-1) is to provide adhesion between endothelial cells and leukocytes after injury or stress. ICAM-1 binds to leukocyte function-associated antigen (LFA-1) or macrophage-1 antigen (Mac-1). However, ICAM-1 is also used as a receptor by the major group of human rhinoviruses and is a catalyst for the subsequent viral uncoating during cell entry. The three-dimensional atomic structure of the two amino-terminal domains (D1 and D2) of ICAM-1 has been determined to 2.2-A resolution and fitted into a cryoelectron microscopy reconstruction of a rhinovirus-ICAM-1 complex. Rhinovirus attachment is confined to the BC, CD, DE, and FG loops of the amino-terminal Ig-like domain (D1) at the end distal to the cellular membrane. The loops are considerably different in structure to those of human ICAM-2 or murine ICAM-1, which do not bind rhinoviruses. There are extensive charge interactions between ICAM-1 and human rhinoviruses, which are mostly conserved in both major and minor receptor groups of rhinoviruses. The interaction of ICAMs with LFA-1 is known to be mediated by a divalent cation bound to the insertion (I)-domain on the alpha chain of LFA-1 and the carboxyl group of a conserved glutamic acid residue on ICAMs. Domain D1 has been docked with the known structure of the I-domain. The resultant model is consistent with mutational data and provides a structural framework for the adhesion between these molecules.
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==Disease==
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The structure of the two amino-terminal domains of human ICAM-1 suggests how it functions as a rhinovirus receptor and as an LFA-1 integrin ligand.,Bella J, Kolatkar PR, Marlor CW, Greve JM, Rossmann MG Proc Natl Acad Sci U S A. 1998 Apr 14;95(8):4140-5. PMID:9539703<ref>PMID:9539703</ref>
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Known disease associated with this structure: Malaria, cerebral, susceptibility to OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=147840 147840]]
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==About this Structure==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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1IAM is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with NAG as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1IAM OCA].
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</div>
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<div class="pdbe-citations 1iam" style="background-color:#fffaf0;"></div>
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==Reference==
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==See Also==
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The structure of the two amino-terminal domains of human ICAM-1 suggests how it functions as a rhinovirus receptor and as an LFA-1 integrin ligand., Bella J, Kolatkar PR, Marlor CW, Greve JM, Rossmann MG, Proc Natl Acad Sci U S A. 1998 Apr 14;95(8):4140-5. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9539703 9539703]
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*[[Intercellular adhesion molecule|Intercellular adhesion molecule]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Bella, J.]]
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[[Category: Bella J]]
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[[Category: Greve, J.M.]]
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[[Category: Greve JM]]
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[[Category: Kolatkar, P.R.]]
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[[Category: Kolatkar PR]]
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[[Category: Marlor, C.]]
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[[Category: Marlor C]]
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[[Category: Rossmann, M.G.]]
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[[Category: Rossmann MG]]
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[[Category: NAG]]
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[[Category: cell adhesion]]
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[[Category: glycoprotein]]
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[[Category: immunoglobulin fold]]
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[[Category: integrin ligand]]
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[[Category: lfa-1 ligand]]
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[[Category: rhinovirus receptor]]
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[[Category: transmembrane]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 17:28:01 2007''
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Current revision

STRUCTURE OF THE TWO AMINO-TERMINAL DOMAINS OF HUMAN INTERCELLULAR ADHESION MOLECULE-1, ICAM-1

PDB ID 1iam

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