This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Rubredoxin 3D structures
From Proteopedia
(Difference between revisions)
(New page: ==3D structures of rubredoxin== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *Rubredoxin oxidized containing Fe+...) |
|||
| (3 intermediate revisions not shown.) | |||
| Line 7: | Line 7: | ||
| - | **[[1fhh]], [[1iro]], [[4rxn]], [[5rxn]] – CpRXN + Fe+3 – Clostridium pasteurianum<br /> | + | **[[1fhh]], [[1iro]], [[4rxn]], [[5rxn]] – CpRXN + Fe+3 – ''Clostridium pasteurianum''<br /> |
| - | [[1bfy]] – CpRXN + Fe+3 – NMR<br /> | + | **[[1bfy]] – CpRXN + Fe+3 – NMR<br /> |
**[[1b2j]], [[1b2o]], [[1be7]], [[1c09]], [[1smm]], [[1t9o]], [[1t9p]], [[1t9q]] – CpRXN (mutant) + Fe+3 <br /> | **[[1b2j]], [[1b2o]], [[1be7]], [[1c09]], [[1smm]], [[1t9o]], [[1t9p]], [[1t9q]] – CpRXN (mutant) + Fe+3 <br /> | ||
| - | + | **[[1brf]], [[1caa]], [[1cad]], [[3kyu]], [[3kyv]], [[3kyw]], [[3kyy]], [[3kyx]], [[4ar5]], [[5nw3]] – PfRXN + Fe+3 – ''Pyrococcus furiosus''<br /> | |
| - | [[1bq8]], [[1bq9]], [[1iu5]] – PfRXN (mutant) + Fe+3 <br /> | + | **[[1bq8]], [[1bq9]], [[1iu5]] – PfRXN (mutant) + Fe+3 <br /> |
**[[1vcx]], [[3ryg]], [[3rz6]], [[3rzt]], [[3ss2]], [[4ar3]], [[4k9f]] – PfRXN + Fe+3 - Neutron<br /> | **[[1vcx]], [[3ryg]], [[3rz6]], [[3rzt]], [[3ss2]], [[4ar3]], [[4k9f]] – PfRXN + Fe+3 - Neutron<br /> | ||
**[[1iu6]] – PfRXN (mutant) + Fe+3 - Neutron<br /> | **[[1iu6]] – PfRXN (mutant) + Fe+3 - Neutron<br /> | ||
| - | **[[1yk4]], [[1yk5]], [[2pya]] – RXN + Fe+3 – Pyrococcus abysii<br /> | + | **[[1yk4]], [[1yk5]], [[2pya]] – RXN + Fe+3 – ''Pyrococcus abysii''<br /> |
| - | + | **[[1rdv]], [[2rdv]], [[7rxn]], [[8rxn]] – DvRXN + Fe+3 – ''Desulfovibrio vulgaris'' <br /> | |
| - | [[6rxn]] – DdRXN + Fe+3 – Desulfovibrio desulfuricans<br /> | + | **[[6rxn]] – DdRXN + Fe+3 – ''Desulfovibrio desulfuricans''<br /> |
| - | **[[1rdg]], [[2dsx]] – RXN + Fe+3 – Desulfovibrio gigas<br /> | + | **[[1rdg]], [[2dsx]] – RXN + Fe+3 – ''Desulfovibrio gigas''<br /> |
| - | **[[2v3b]] – RXN2 + RXN reductase + FAD + Fe+3 – Pseudomonas aeruginosa<br /> | + | **[[2v3b]] – RXN2 + RXN reductase + FAD + Fe+3 – ''Pseudomonas aeruginosa''<br /> |
*Rubredoxin reduced containing Fe+2 | *Rubredoxin reduced containing Fe+2 | ||
| Line 35: | Line 35: | ||
**[[1e8j]] – DgRXN + Zn+2 - NMR<br /> | **[[1e8j]] – DgRXN + Zn+2 - NMR<br /> | ||
**[[1b13]], [[1irn]] – CpRXN + Zn+2 <br /> | **[[1b13]], [[1irn]] – CpRXN + Zn+2 <br /> | ||
| - | **[[1dx8]], [[1h7v]] – RXN + Zn+2 – Guillardia theta - NMR<br /> | + | **[[1dx8]], [[1h7v]] – RXN + Zn+2 – ''Guillardia theta'' - NMR<br /> |
| - | **[[ | + | **[[7a9a]] – MtRXN + Zn+2 + Fe+3 – Mycobacterium tuberculosis <br /> |
| + | **[[2kn9]] – MtRXN + Zn+2 - NMR<br /> | ||
*Rubredoxin containing other metals | *Rubredoxin containing other metals | ||
| Line 50: | Line 51: | ||
**[[6nw0]] – DdRXN + Ni+2 <br /> | **[[6nw0]] – DdRXN + Ni+2 <br /> | ||
**[[6nw1]] – DdRXN (mutant) + Ni+2 <br /> | **[[6nw1]] – DdRXN (mutant) + Ni+2 <br /> | ||
| - | [[1s24]] – RXN domain II 86-172 + Cd+2 – Pseudomonas oleovorans - NMR<br /> | + | **[[1s24]] – RXN domain II 86-172 + Cd+2 – ''Pseudomonas oleovorans'' - NMR<br /> |
*Rubredoxin not containing metal | *Rubredoxin not containing metal | ||
**[[1qcv]], [[1rwd]] – PfRXN (mutant) <br /> | **[[1qcv]], [[1rwd]] – PfRXN (mutant) <br /> | ||
| - | **[[ | + | **[[1spw]] – DgRXN (mutant) - NMR<br /> |
| - | **[[2m4y]] – RXN – Mycobacterium ulcerans<br /> | + | **[[2m4y]] – RXN – ''Mycobacterium ulcerans''<br /> |
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Current revision
3D structures of rubredoxin
Updated on 13-November-2023
