4otv
From Proteopedia
(Difference between revisions)
| Line 4: | Line 4: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4otv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Operophtera_brumata_cypovirus_18 Operophtera brumata cypovirus 18]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OTV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OTV FirstGlance]. <br> | <table><tr><td colspan='2'>[[4otv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Operophtera_brumata_cypovirus_18 Operophtera brumata cypovirus 18]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OTV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OTV FirstGlance]. <br> | ||
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4otv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4otv OCA], [https://pdbe.org/4otv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4otv RCSB], [https://www.ebi.ac.uk/pdbsum/4otv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4otv ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4otv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4otv OCA], [https://pdbe.org/4otv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4otv RCSB], [https://www.ebi.ac.uk/pdbsum/4otv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4otv ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[https://www.uniprot.org/uniprot/Q30C70_9VIRU Q30C70_9VIRU] | [https://www.uniprot.org/uniprot/Q30C70_9VIRU Q30C70_9VIRU] | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | This work demonstrates that with the use of a microfocus synchrotron beam the structure of a novel viral polyhedrin could be successfully determined from microcrystals within cells, removing the preparatory step of sample isolation and maintaining a favourable biological environment. The data obtained are of high quality, comparable to that obtained from isolated crystals, and enabled a facile structure determination. A small but significant difference is observed between the unit-cell parameters and the mosaic spread of in cellulo and isolated crystals, suggesting that even these robust crystals are adversely affected by removal from the cell. | ||
| - | |||
| - | In cellulo structure determination of a novel cypovirus polyhedrin.,Axford D, Ji X, Stuart DI, Sutton G Acta Crystallogr D Biol Crystallogr. 2014 May;70(Pt 5):1435-41. doi:, 10.1107/S1399004714004714. Epub 2014 Apr 30. PMID:24816111<ref>PMID:24816111</ref> | ||
| - | |||
| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 4otv" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Polyhedrin|Polyhedrin]] | *[[Polyhedrin|Polyhedrin]] | ||
| - | == References == | ||
| - | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
Current revision
Crystal structure of in cellulo Operophtera brumata CPV18
| |||||||||||
