This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jwq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:12, 29 May 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1jwq.jpg|left|200px]]
 
-
<!--
+
==Structure of the catalytic domain of CwlV, N-acetylmuramoyl-L-alanine amidase from Bacillus(Paenibacillus) polymyxa var.colistinus==
-
The line below this paragraph, containing "STRUCTURE_1jwq", creates the "Structure Box" on the page.
+
<StructureSection load='1jwq' size='340' side='right'caption='[[1jwq]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1jwq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Paenibacillus_polymyxa Paenibacillus polymyxa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JWQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JWQ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1jwq| PDB=1jwq | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jwq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jwq OCA], [https://pdbe.org/1jwq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jwq RCSB], [https://www.ebi.ac.uk/pdbsum/1jwq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jwq ProSAT]</span></td></tr>
-
 
+
</table>
-
'''Structure of the catalytic domain of CwlV, N-acetylmuramoyl-L-alanine amidase from Bacillus(Paenibacillus) polymyxa var.colistinus'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9LCR3_PAEPO Q9LCR3_PAEPO]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1JWQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Paenibacillus_polymyxa Paenibacillus polymyxa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JWQ OCA].
+
Check<jmol>
-
[[Category: N-acetylmuramoyl-L-alanine amidase]]
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jw/1jwq_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jwq ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Paenibacillus polymyxa]]
[[Category: Paenibacillus polymyxa]]
-
[[Category: Single protein]]
+
[[Category: Akita M]]
-
[[Category: Akita, M.]]
+
[[Category: Hikage T]]
-
[[Category: Hikage, T.]]
+
[[Category: Ise F]]
-
[[Category: Ise, F.]]
+
[[Category: Koyama Y]]
-
[[Category: Koyama, Y.]]
+
[[Category: Nojiri Y]]
-
[[Category: Nojiri, Y.]]
+
[[Category: Sekiguchi J]]
-
[[Category: Sekiguchi, J.]]
+
[[Category: Shida T]]
-
[[Category: Shida, T.]]
+
[[Category: Shirai T]]
-
[[Category: Shirai, T.]]
+
[[Category: Suzuki A]]
-
[[Category: Suzuki, A.]]
+
[[Category: Yamane T]]
-
[[Category: Yamane, T.]]
+
-
[[Category: Open alpha-beta-alpha]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 22:01:10 2008''
+

Current revision

Structure of the catalytic domain of CwlV, N-acetylmuramoyl-L-alanine amidase from Bacillus(Paenibacillus) polymyxa var.colistinus

PDB ID 1jwq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1jwq"
Personal tools