1k6f

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[[Image:1k6f.jpg|left|200px]]
 
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==Crystal Structure of the Collagen Triple Helix Model [(Pro-Pro-Gly)10]3==
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The line below this paragraph, containing "STRUCTURE_1k6f", creates the "Structure Box" on the page.
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<StructureSection load='1k6f' size='340' side='right'caption='[[1k6f]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1k6f]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Saimiriine_gammaherpesvirus_2 Saimiriine gammaherpesvirus 2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K6F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K6F FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k6f OCA], [https://pdbe.org/1k6f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k6f RCSB], [https://www.ebi.ac.uk/pdbsum/1k6f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k6f ProSAT]</span></td></tr>
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{{STRUCTURE_1k6f| PDB=1k6f | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q80BK4_SHV2 Q80BK4_SHV2]
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'''Crystal Structure of the Collagen Triple Helix Model [(Pro-Pro-Gly)10]3'''
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==See Also==
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*[[Collagen 3D structures|Collagen 3D structures]]
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__TOC__
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==Overview==
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</StructureSection>
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The first report of the full-length structure of the collagen-like polypeptide [(Pro-Pro-Gly)(10)](3) is given. This structure was obtained from crystals grown in a microgravity environment, which diffracted up to 1.3 A, using synchrotron radiation. The final model, which was refined to an R(factor) of 0.18, is the highest-resolution description of a collagen triple helix reported to date. This structure provides clues regarding a series of aspects related to collagen triple helix structure and assembly. The strict dependence of proline puckering on the position inside the Pro-Pro-Gly triplets and the correlation between backbone and side chain dihedral angles support the propensity-based mechanism of triple helix stabilization/destabilization induced by hydroxyproline. Furthermore, the analysis of [(Pro-Pro-Gly)(10)](3) packing, which is governed by electrostatic interactions, suggests that charges may act as locking features in the axial organization of triple helices in the collagen fibrils.
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[[Category: Large Structures]]
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[[Category: Saimiriine gammaherpesvirus 2]]
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==About this Structure==
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[[Category: Berisio R]]
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K6F OCA].
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[[Category: Mazzarella L]]
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[[Category: Vitagliano L]]
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==Reference==
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[[Category: Zagari A]]
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Crystal structure of the collagen triple helix model [(Pro-Pro-Gly)(10)](3)., Berisio R, Vitagliano L, Mazzarella L, Zagari A, Protein Sci. 2002 Feb;11(2):262-70. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11790836 11790836]
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[[Category: Berisio, R.]]
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[[Category: Mazzarella, L.]]
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[[Category: Vitagliano, L.]]
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[[Category: Zagari, A]]
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[[Category: Amino acid preference]]
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[[Category: Collagen stability]]
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[[Category: Puckering]]
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[[Category: Triple helix]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 22:21:44 2008''
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Current revision

Crystal Structure of the Collagen Triple Helix Model [(Pro-Pro-Gly)10]3

PDB ID 1k6f

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