8odw

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'''Unreleased structure'''
 
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The entry 8odw is ON HOLD until Paper Publication
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==Crystal structure of LbmA Ox-ACP didomain in complex with NADP and ethyl glycinate from the lobatamide PKS (Gynuella sunshinyii)==
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<StructureSection load='8odw' size='340' side='right'caption='[[8odw]], [[Resolution|resolution]] 3.07&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8odw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Gynuella_sunshinyii Gynuella sunshinyii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8ODW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8ODW FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.07&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GEE:ETHYL+GLYCINATE'>GEE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8odw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8odw OCA], [https://pdbe.org/8odw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8odw RCSB], [https://www.ebi.ac.uk/pdbsum/8odw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8odw ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A0C5VQJ2_9GAMM A0A0C5VQJ2_9GAMM]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Modular trans-acyltransferase polyketide synthases (trans-AT PKSs) are enzymatic assembly lines that biosynthesize complex polyketide natural products. Relative to their better studied cis-AT counterparts, the trans-AT PKSs introduce remarkable chemical diversity into their polyketide products. A notable example is the lobatamide A PKS, which incorporates a methylated oxime. Here we demonstrate biochemically that this functionality is installed on-line by an unusual oxygenase-containing bimodule. Furthermore, analysis of the oxygenase crystal structure coupled with site-directed mutagenesis allows us to propose a model for catalysis, as well as identifying key protein-protein interactions that support this chemistry. Overall, our work adds oxime-forming machinery to the biomolecular toolbox available for trans-AT PKS engineering, opening the way to introducing such masked aldehyde functionalities into diverse polyketides.
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Authors: Francois, R.M.M., Fraley, A.E., Piel, J., Weissman, K.J., Gruez, A.
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Modular oxime formation by a trans-AT polyketide synthase.,Minas HA, Francois RMM, Hemmerling F, Fraley AE, Dieterich CL, Rudisser SH, Meoded RA, Collin S, Weissman KJ, Gruez A, Piel J Angew Chem Int Ed Engl. 2023 May 22:e202304481. doi: 10.1002/anie.202304481. PMID:37216334<ref>PMID:37216334</ref>
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Description: Crystal structure of LbmA Ox-ACP didomain in complex with NADP and ethyl glycinate from the lobatamide PKS (Gynuella sunshinyii)
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Gruez, A]]
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<div class="pdbe-citations 8odw" style="background-color:#fffaf0;"></div>
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[[Category: Fraley, A.E]]
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== References ==
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[[Category: Weissman, K.J]]
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<references/>
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[[Category: Francois, R.M.M]]
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__TOC__
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[[Category: Piel, J]]
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</StructureSection>
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[[Category: Gynuella sunshinyii]]
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[[Category: Large Structures]]
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[[Category: Fraley AE]]
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[[Category: Francois RMM]]
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[[Category: Gruez A]]
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[[Category: Piel J]]
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[[Category: Weissman KJ]]

Current revision

Crystal structure of LbmA Ox-ACP didomain in complex with NADP and ethyl glycinate from the lobatamide PKS (Gynuella sunshinyii)

PDB ID 8odw

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