This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Gp120 3D structures

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:24, 27 April 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 51: Line 51:
**[[4rfo]], [[4rfn]], [[6mg7]] - Gp120 Clade A/E 4-492 (mutant) + M48U1 peptide + antibody<br />
**[[4rfo]], [[4rfn]], [[6mg7]] - Gp120 Clade A/E 4-492 (mutant) + M48U1 peptide + antibody<br />
**[[2qad]], [[3lqa]], [[4h8w]] - Gp120 Clade A/E + CD4 + antibody<br />
**[[2qad]], [[3lqa]], [[4h8w]] - Gp120 Clade A/E + CD4 + antibody<br />
-
**[[4tvp]], [[6v6w]], [[7ucf]] - Gp120 Clade A/E + Gp41 core + antibody <br />
+
**[[4tvp]], [[6utk]], [[6vkn]], [[6v6w]], [[7kmd]], [[7ucf]] - Gp120 Clade A/E + Gp41 core + antibody <br />
-
**[[6mpg]], [[6n1v]], [[6nfc]], [[6x96]], [[6x97]], [[7kde]], [[7lg6]], [[7lu9]], [[7lxm]], [[7lxn]], [[7ly9]], [[7mdt]], [[7mdu]], [[7mxe]], [[7pc2]], [[7rsn]], [[7rso]], [[7sd3]], [[7tfn]], [[7tfo]], [[7ugn]], [[7ugp]], [[7ugq]], [[7zlk]], [[8fis]] - Gp120 Clade A/E + Gp41 core + antibody – Cryo EM<br />
+
**[[3j5m]], [[6mpg]], [[6mph]], [[6n1v]], [[6n1w]], [[6nf2]], [[6nfc]], [[6x96]], [[6x97]], [[7kde]], [[7lg6]], [[7lu9]], [[7lxm]], [[7lxn]], [[7ly9]], [[7mdt]], [[7mdu]], [[7mxe]], [[7pc2]], [[7rsn]], [[7rso]], [[7sd3]], [[7sq1]], [[7t73]], [[7t74]], [[7t75]], [[7t76]], [[7t77]], [[7tfn]], [[7tfo]], [[7ugn]], [[7ugp]], [[7ugq]], [[7z3a]], [[7zlk]], [[8fis]] - Gp120 Clade A/E + Gp41 core + antibody – Cryo EM<br />
**[[6x98]], [[6ot1]], [[7n28]] - Gp120 Clade A/E (mutant) + Gp41 core + antibody – Cryo EM<br />
**[[6x98]], [[6ot1]], [[7n28]] - Gp120 Clade A/E (mutant) + Gp41 core + antibody – Cryo EM<br />
 +
**[[7lpn]] - Gp120 Clade A/E + Gp41 core + VHH – Cryo EM<br />
**[[3jwd]], [[3jwo]], [[2i5y]], [[2i60]] - Gp120 core + hCD4 N terminal + antibody <br />
**[[3jwd]], [[3jwo]], [[2i5y]], [[2i60]] - Gp120 core + hCD4 N terminal + antibody <br />
**[[2nxy]], [[2nxz]], [[2ny0]], [[2ny1]], [[2ny2]], [[2ny3]], [[2ny4]], [[2ny5]], [[2ny6]], [[1gc1]], [[1g9m]], [[1g9n]], [[1rzj]], [[1rzk]], [[1yyl]], [[1yym]], [[2b4c]] - Gp120 core (mutant) + hCD4 N terminal + antibody <br />
**[[2nxy]], [[2nxz]], [[2ny0]], [[2ny1]], [[2ny2]], [[2ny3]], [[2ny4]], [[2ny5]], [[2ny6]], [[1gc1]], [[1g9m]], [[1g9n]], [[1rzj]], [[1rzk]], [[1yyl]], [[1yym]], [[2b4c]] - Gp120 core (mutant) + hCD4 N terminal + antibody <br />
**[[5a8h]], [[5a7x]], [[4rqs]], [[4r4h]], [[4r2g]], [[4p9h]] - Gp120 core + hCD4 D1-D2 domain + antibody<br />
**[[5a8h]], [[5a7x]], [[4rqs]], [[4r4h]], [[4r2g]], [[4p9h]] - Gp120 core + hCD4 D1-D2 domain + antibody<br />
**[[4laj]] - Gp120 core + CD4 mimetic miniprotein + antibody<br />
**[[4laj]] - Gp120 core + CD4 mimetic miniprotein + antibody<br />
-
**[[5w4l]], [[5uwe]], [[6w4m]] - Gp120 core (mutant) + CD4 mimetic peptide + antibody<br />
+
**[[5w4l]], [[6w4m]] - Gp120 core (mutant) + CD4 mimetic peptide + antibody<br />
**[[4r4f]], [[4r4n]] - Gp120 core + M48U1 peptide + antibody<br />
**[[4r4f]], [[4r4n]] - Gp120 core + M48U1 peptide + antibody<br />
**[[5v8l]], [[5v8m]], [[5uty]], [[5utf]], [[5um8]], [[5jsa]], [[5js9]], [[5i8h]], [[5d9q]], [[5cjx]], [[5c7k]], [[6mft]], [[6mdt]], [[6mco]], [[6d2p]], [[6ck9]], [[6ch9]], [[6ch8]], [[6ch7]], [[6wix]] - Gp120 core + Gp41 + antibody<br />
**[[5v8l]], [[5v8m]], [[5uty]], [[5utf]], [[5um8]], [[5jsa]], [[5js9]], [[5i8h]], [[5d9q]], [[5cjx]], [[5c7k]], [[6mft]], [[6mdt]], [[6mco]], [[6d2p]], [[6ck9]], [[6ch9]], [[6ch8]], [[6ch7]], [[6wix]] - Gp120 core + Gp41 + antibody<br />
-
**[[6ccb]], [[6x5b]], [[6x9r]], [[6x9s]], [[6x9t]], [[6x9u]], [[6x9v]] - Gp120 29-504 (mutant) + Gp41 + antibody<br />
+
**[[6ccb]], [[6x5b]], [[6x9r]], [[6x9s]], [[6x9t]], [[6x9u]], [[6x9v]], [[6xrt]], [[7n65]], [[7pc2]], [[7rai]] - Gp120 29-504 (mutant) + Gp41 + antibody<br />
-
**[[6cde]], [[6cdi]], [[6okp]], [[6e5p]], [[6cuf]], [[6cue]], [[6chb]], [[5u1f]], [[5thr]], [[4cc8]], [[3j70]], [[6udk]], [[6v8z]], [[6vlr]], [[6vo1]], [[6vtt]], [[7lo6]], [[7mxd]], [[7ugo]] - Gp120 core + Gp41 + antibody – Cryo EM<br />
+
**[[6cde]], [[6cdi]], [[6okp]], [[6e5p]], [[6cuf]], [[6cue]], [[6chb]], [[5u1f]], [[5thr]], [[4cc8]], [[3j70]], [[6udj]], [[6udk]], [[6v8z]], [[6vlr]], [[6vo1]], [[6vtt]], [[7lo6]], [[7mxd]], [[7ugo]] - Gp120 core + Gp41 + antibody – Cryo EM<br />
-
**[[6mn7]], [[6nqd]], [[6olp]], [[6orn]], [[6oro]], [[6orp]], [[6orq]], [[6pw6]], [[6u59]], [[6uda]], [[6ulc]], [[6um6]], [[6um7]], [[6v8x]], [[6vi0]], [[6vo0]], [[6vo3]], [[6vtt]], [[6vy2]], [[7l86]], [[7l87]], [[7l88]], [[7l89]], [[7l8a]], [[7l8b]], [[7l8c]], [[7l8d]], [[7l8s]], [[7l8t]], [[7l8u]], [[7l8w]], [[7l8x]], [[7l8y]], [[7l8z]], [[7l90]], [[7ll1]], [[7ll2]], [[7llk]], [[7lua]] - Gp120 29-508 + Gp41 + antibody – Cryo EM<br />
+
**[[6mn7]], [[6nqd]], [[6olp]], [[6orn]], [[6oro]], [[6orp]], [[6orq]], [[6osy]], [[6pw6]], [[6u59]], [[6uda]], [[6ulc]], [[6um6]], [[6um7]], [[6v8x]], [[6vi0]], [[6vo0]], [[6vo3]], [[6vtt]], [[6vy2]], [[7l86]], [[7l87]], [[7l88]], [[7l89]], [[7l8a]], [[7l8b]], [[7l8c]], [[7l8d]], [[7l8s]], [[7l8t]], [[7l8u]], [[7l8w]], [[7l8x]], [[7l8y]], [[7l8z]], [[7l90]], [[7ll1]], [[7ll2]], [[7llk]], [[7lua]] - Gp120 29-508 + Gp41 + antibody – Cryo EM<br />
**[[6nc2]], [[6nc3]] - Gp120 29-508 (mutant) + Gp41 + antibody – Cryo EM<br />
**[[6nc2]], [[6nc3]] - Gp120 29-508 (mutant) + Gp41 + antibody – Cryo EM<br />
**[[5fyk]], [[5fyj]], [[4nco]], [[6nnj]], [[6nnf]], [[6nm6]] - Gp120 core (mutant) + Gp41 + antibody<br />
**[[5fyk]], [[5fyj]], [[4nco]], [[6nnj]], [[6nnf]], [[6nm6]] - Gp120 core (mutant) + Gp41 + antibody<br />
Line 70: Line 71:
**[[6um5]] - Gp120 30-489 + Gp41 + antibody + CH848 – Cryo EM<br />
**[[6um5]] - Gp120 30-489 + Gp41 + antibody + CH848 – Cryo EM<br />
**[[6vpx]], [[7lok]] - Gp120 core + Gp41 + antibody + peptide – Cryo EM<br />
**[[6vpx]], [[7lok]] - Gp120 core + Gp41 + antibody + peptide – Cryo EM<br />
 +
**[[7txd]] – Gp120 core + Gp41 + darpin + CD4 – Cryo EM<br />
*Gp120 from HIV-2 binary complex
*Gp120 from HIV-2 binary complex
Line 79: Line 81:
**[[2bf1]], [[3fus]] - Gp120 core<br />
**[[2bf1]], [[3fus]] - Gp120 core<br />
**[[3jcc]], [[3jcb]] - Gp120 core + CD4 + antibody – Cryo EM<br />
**[[3jcc]], [[3jcb]] - Gp120 core + CD4 + antibody – Cryo EM<br />
-
**[[7t2p]], [[8dua]] - Gp120 + Gp41 core + antibody – Cryo EM<br />
+
**[[7t2p]], [[7t4g]], [[8dua]] - Gp120 + Gp41 core + antibody – Cryo EM<br />
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

3D structures of Gp120

Updated on 27-April-2023

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

Personal tools