Template:STRUCTURE 1kme

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1kme, resolution 2.00&Aring; (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= <scene name='pdbligand=GLC...)
Current revision (10:39, 26 July 2012) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1kme, resolution 2.00&Aring; (<scene name='initialview01'>initial scene</scene>)
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1kme]], [[Resolution|resolution]] 2.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|SITE=
+
|LIGAND= <scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=SQU:2,10,23-TRIMETHYL-TETRACOSANE'>SQU</scene>
-
|LIGAND= <scene name='pdbligand=GLC:GLUCOSE'>GLC</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=SQU:2,10,23-TRIMETHYL-TETRACOSANE'>SQU</scene>
+
-
|ACTIVITY=
+
-
|GENE=
+
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01036 Bac_rhodopsin]</span>
+
-
|RELATEDENTRY=
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kme OCA], [http://www.ebi.ac.uk/pdbsum/1kme PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1kme RCSB]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kme OCA], [http://www.ebi.ac.uk/pdbsum/1kme PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1kme RCSB]</span>
 +
|FUNCTION={{GO|id=GO:0015078 | text = hydrogen ion transmembrane transporter activity}}{{GO|id=GO:0009881 | text = photoreceptor activity}}{{GO|id=GO:0004872 | text = receptor activity}}{{GO|id=GO:0005216 | text = ion channel activity}}
 +
|PROCESS={{GO|id=GO:0050896 | text = response to stimulus}}{{GO|id=GO:0006810 | text = transport}}{{GO|id=GO:0018298 | text = protein-chromophore linkage}}{{GO|id=GO:0007602 | text = phototransduction}}{{GO|id=GO:0006811 | text = ion transport}}{{GO|id=GO:0015992 | text = proton transport}}
 +
|COMPONENT={{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0016021 | text = integral to membrane}}
 +
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kmeA00 1Kmea00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kmeB00 1Kmeb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001425 Ipr001425]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01036 PF01036]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=68692 d1kmea_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=68693 d1kmeb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02945 P02945]</span>
 +
|uPDB=1KME|CONSURF={{!}}-
 +
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 +
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
 +
{{!}} '''Toggle Conservation Colors:'''
 +
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
Rows = identical sequences:
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>A [x]</text>
 +
<name>jmb_1kme_A</name>
 +
<title>toggle chain A</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>B [x]</text>
 +
<name>jmb_1kme_B</name>
 +
<title>toggle chain B</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
}}
}}

Current revision

Drag the structure with the mouse to rotate
1kme, resolution 2.00Å ()
Ligands: , ,
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1kme"
Personal tools