This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Methane monooxygenase

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:43, 28 June 2023) (edit) (undo)
 
Line 14: Line 14:
</StructureSection>
</StructureSection>
- 
-
==3D structures of methane monooxygenase==
 
- 
-
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
 
-
{{#tree:id=OrganizedByTopic|openlevels=0|
 
- 
-
*'''Soluble methane monooxygenase'''
 
- 
-
**[[1mmo]], [[1mty]], [[1fyz]], [[1fz0]], [[1fz1]], [[1fz2]], [[1fz3]], [[1fz4]], [[1fz5]], [[1fz6]], [[1fz7]], [[1fzh]], [[1fzi]], [[1xu5]] – McsMMO α+β+γ subunits + Fe – ''Methylococcus capsulatus''<br />
 
-
**[[7tc7]], [[7tc8]] – McsMMO α+β+γ subunits + Fe – Cryo EM<br />
 
-
**[[1xmf]] – McsMMO α+β+γ subunits + Mn<br />
 
-
**[[1xmh]] – McsMMO α+β+γ subunits + Co<br />
 
-
**[[1xmg]] – McsMMO α+β+γ subunits <br />
 
-
**[[1mhy]], [[1mhz]], [[6vk5]], [[6vk6]], [[6vk7]], [[6yd0]], [[6ydi]], [[6ydu]], [[6yy3]], [[7m8q]], [[7m8r]] – MtMMO α+β+γ subunits + Fe+3 – ''Methylosinus trichosporium''<br />
 
-
**[[6vk4]] – MtsMMO α+β+γ subunits + Fe+3 + Fe+2<br />
 
-
**[[6vk8]] – MtsMMO α+β+γ subunits + Fe+3 + succinate<br />
 
-
**[[6d7k]] – MtsMMO α+β+γ+inhibitory subunits + Fe+3<br />
 
- 
-
*'''Particulate methane monooxygenase'''
 
- 
-
**[[6cxh]] – MMO α+β+γ subunits + Cu – ''Methylomicrobium alcaliphilum''<br />
 
-
**[[7s4l]] – MapMMO α+β+γ subunits + Cu – Cryo EM<br />
 
-
**[[7ev9]] – McpMMO α+β+γ subunits + Cu – Cryo EM<br />
 
-
**[[1yew]], [[3rgb]] – McpMMO α+β+γ subunits + Cu + Zn<br />
 
-
**[[7s4h]], [[7s4i]], [[7s4j]], [[7s4k]], [[7t4o]], [[7t4p]], [[7yzy]] – McsMMO α+β+γ subunits + Cu – Cryo EM<br />
 
-
**[[3rfr]] – MepMMO α+β+γ subunits + Cu + Zn - ''Methylocystis''<br />
 
- 
-
*Soluble MMO complexes
 
- 
-
**[[1fz8]] – McsMMO α+β+γ subunits + Fe + dibromomethane<br />
 
-
**[[1xvc]] – McsMMO α+β+γ subunits + Fe + bromoethane + bromopentane <br />
 
-
**[[1xvb]] – McsMMO α+β+γ subunits + Fe + bromoethane + bromopropane + bromobutane + bromohexanol <br />
 
-
**[[1fz9]] – McsMMO α+β+γ subunits + Fe + iodoethane<br />
 
-
**[[1xvd]] – McsMMO α+β+γ subunits + Fe + fluorophenol<br />
 
-
**[[1xve]] – McsMMO α+β+γ subunits + Fe + bromobutenol<br />
 
-
**[[1xvf]] – McsMMO α+β+γ subunits + Fe + chloropropanol<br />
 
-
**[[1xvg]] – McsMMO α+β+γ subunits + Fe + bromoethanol<br />
 
-
**[[1xu3]] – McsMMO α+β+γ subunits + Fe + bromophenol<br />
 
-
**[[4gam]] – McsMMO α+β+γ subunits + Fe + MMO regulatory protein B<br />
 
-
**[[7s6q]], [[7s6r]], [[7s6s]], [[7s6t]], [[7s7h]] – MtsMMO α+β+γ subunits + Fe + MMO regulatory protein B<br />
 
- 
-
*'''Particulate methane monooxygenase complexes'''
 
- 
-
**[[4phz]], [[4pi0]] – MepMMO α+β+γ subunits + Cu + peptide <br />
 
-
**[[7s4m]] – MepMMO α+β+γ subunits + Cu + peptide – Cryo EM<br />
 
-
**[[4pi2]] – MepMMO α+β+γ subunits + Cu + Zn + peptide <br />
 
-
**[[3chx]] – MtsMMO α+β+γ subunits + Cu + peptide <br />
 
- 
-
*MMO γ subunit (MMO reductase, MMOR)
 
- 
-
**[[2mob]] – MtMMOR <br />
 
-
**[[1ckv]] – MtMMOR - NMR<br />
 
-
**[[1jq4]] – McMMOR N terminal + Fe2S2 - NMR<br />
 
-
**[[1tvc]] – McMMOR C terminal + FAD derivative - NMR<br />
 
-
}}
 
== References ==
== References ==

Current revision

Structure of methane monooxygenase α (grey and green) +β (pink and yellow) +γ (magenta and cyan) subunits complex with Fe+3 (red), Ca+2 (green) and dibromomethane (PDB code 1fz8).

Drag the structure with the mouse to rotate

References

  1. Lipscomb JD. Biochemistry of the soluble methane monooxygenase. Annu Rev Microbiol. 1994;48:371-99. PMID:7826011 doi:http://dx.doi.org/10.1146/annurev.mi.48.100194.002103
  2. Miyaji A. Particulate methane monooxygenase from Methylosinus trichosporium OB3b. Methods Enzymol. 2011;495:211-25. doi: 10.1016/B978-0-12-386905-0.00014-0. PMID:21419924 doi:http://dx.doi.org/10.1016/B978-0-12-386905-0.00014-0

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

Personal tools